RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 USO1O60763 962 aaKnown RBP17.57■□□□□ 0.4
SHISA2-201ENST00000319420 HSD17B4P51659 736 aa17.57■□□□□ 0.4
SHISA2-201ENST00000319420 POLR2FP61218 127 aaKnown RBP17.57■□□□□ 0.4
SHISA2-201ENST00000319420 SEMA3FQ13275 785 aa17.57■□□□□ 0.4
SHISA2-201ENST00000319420 KNOP1Q1ED39 458 aaKnown RBP17.57■□□□□ 0.4
SHISA2-201ENST00000319420 UBXN4Q92575 508 aa17.57■□□□□ 0.4
SHISA2-201ENST00000319420 POLR3CQ9BUI4 534 aaPredicted RBP17.57■□□□□ 0.4
SHISA2-201ENST00000319420 LSM14BQ9BX40 385 aaKnown RBP17.57■□□□□ 0.4
SHISA2-201ENST00000319420 TTYH3Q9C0H2 523 aa17.57■□□□□ 0.4
SHISA2-201ENST00000319420 RNF181Q9P0P0 153 aa17.57■□□□□ 0.4
SHISA2-201ENST00000319420 CYP2J2P51589 502 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 CCDC122Q5T0U0 273 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 MCF2L2Q86YR7 1114 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 NEK11Q8NG66 645 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 CCDC42Q96M95 316 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 DNAJC7Q99615 494 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 ZBED6P86452 979 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 PPP2R3AQ06190 1150 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 TEX35Q5T0J7 233 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 PLA2G4FQ68DD2 849 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 GPRC5CQ9NQ84 441 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 SIK3Q9Y2K2 1263 aa17.56■□□□□ 0.4
SHISA2-201ENST00000319420 RCCD1A6NED2 376 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 TISP43B9A030 160 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 IPO7O95373 1038 aaKnown RBP17.55■□□□□ 0.4
SHISA2-201ENST00000319420 FAM178BQ8IXR5 827 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 ERGIC2Q96RQ1 377 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 LACRTQ9GZZ8 138 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 FER1L6Q2WGJ9 1857 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 AKAP3O75969 853 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 USP14P54578 494 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 NPEPPSP55786 919 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 KCNMA1Q12791 1236 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 PGM5Q15124 567 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
SHISA2-201ENST00000319420 GTPBP4Q9BZE4 634 aaKnown RBP17.55■□□□□ 0.4
SHISA2-201ENST00000319420 PLA2G6O60733 806 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 H2AFXP16104 143 aaPredicted RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 LMNB1P20700 586 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 HERVK_113P62684 666 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 KCNH2Q12809 1159 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 TTLL12Q14166 644 aaPredicted RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 TMEM132BQ14DG7 1078 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 UGCGQ16739 394 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 C1orf186Q6ZWK4 172 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 DNAAF5Q86Y56 855 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 PARVGQ9HBI0 331 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 HDAC6Q9UBN7 1215 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 PITPNM2Q9BZ72 1349 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 AKR1B10O60218 316 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 CLCN6P51797 869 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 SOX10P56693 466 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 SETQ01105 290 aaPredicted RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 TMEM51Q9NW97 253 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 TMOD4Q9NZQ9 345 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 HIP1RO75146 1068 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 EIF4A3P38919 411 aaKnown RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 RAPGEF1Q13905 1077 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 PDCD2LQ9BRP1 358 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 NUP58Q9BVL2 599 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 PCIF1Q9H4Z3 704 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 TUFT1Q9NNX1 390 aa17.54■□□□□ 0.4
SHISA2-201ENST00000319420 ARMCX3Q9UH62 379 aaPredicted RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 DDX41Q9UJV9 622 aaKnown RBP17.54■□□□□ 0.4
SHISA2-201ENST00000319420 FRMD3A2A2Y4 597 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 KIF20AO95235 890 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 NR3C1P04150 777 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 SLC9A1P19634 815 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 PADI6Q6TGC4 694 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHISA2-201ENST00000319420 AGO4Q9HCK5 861 aaKnown RBP17.53■□□□□ 0.4
SHISA2-201ENST00000319420 ARHGAP20Q9P2F6 1191 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 PNMA6AP0CW24 399 aaPredicted RBP17.53■□□□□ 0.4
SHISA2-201ENST00000319420 DNA2P51530 1060 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 EPHA7Q15375 998 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 PSMB7Q99436 277 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHISA2-201ENST00000319420 PXMP2Q9NR77 195 aa17.53■□□□□ 0.4
SHISA2-201ENST00000319420 DHX15O43143 795 aaKnown RBP17.52■□□□□ 0.4
SHISA2-201ENST00000319420 VGLL4Q14135 290 aa17.52■□□□□ 0.4
SHISA2-201ENST00000319420 TREML2Q5T2D2 321 aa17.52■□□□□ 0.4
SHISA2-201ENST00000319420 EEPD1Q7L9B9 569 aa17.52■□□□□ 0.4
SHISA2-201ENST00000319420 GPC2Q8N158 579 aa17.52■□□□□ 0.4
SHISA2-201ENST00000319420 PAGR1Q9BTK6 254 aa17.52■□□□□ 0.4
SHISA2-201ENST00000319420 KIFC3Q9BVG8 833 aa17.52■□□□□ 0.4
SHISA2-201ENST00000319420 ASTN1O14525 1302 aa17.52■□□□□ 0.39
SHISA2-201ENST00000319420 SRGAP2O75044 1071 aa17.52■□□□□ 0.39
SHISA2-201ENST00000319420 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.39
SHISA2-201ENST00000319420 GFPT1Q06210 699 aaPredicted RBP17.52■□□□□ 0.39
SHISA2-201ENST00000319420 JAKMIP2Q96AA8 810 aa17.52■□□□□ 0.39
SHISA2-201ENST00000319420 OTUD5Q96G74 571 aa17.52■□□□□ 0.39
SHISA2-201ENST00000319420 CTAGE9A4FU28 777 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms