RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Sipa1l1Q8C0T5 1782 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mettl11bB2RXM4 283 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gm5878E9PUB3 99 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ccdc121E9Q6D3 323 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Capns1O88456 269 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gpr52P0C5J4 361 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Bach2P97303 839 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 GclcP97494 637 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Uspl1Q3ULM6 1089 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Myo19Q5SV80 963 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nell2Q61220 819 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Armcx2Q6A058 784 aaKnown RBP9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Smarcc2Q6PDG5 1213 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ptrh1Q8BW00 204 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Dctn4Q8CBY8 467 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Hpf1Q8CFE2 346 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Calhm5Q8R100 309 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Acaa1bQ8VCH0 424 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Fbxo33Q8VE08 562 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Sh3bp5lQ99LH9 392 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mrpl1Q99N96 336 aaKnown RBP9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Fdx2Q9CPW2 174 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Actrt2Q9D9L5 377 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 P2rx7Q9Z1M0 595 aa9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cpsf1Q9EPU4 1441 aaKnown RBP9.97□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rbbp8nlA2ABX0 614 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gm28042B7ZCM9 1014 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Scgb1b29D2XZ31 93 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rsbn1lD3Z0K6 821 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Scgb1b20E9PWZ2 93 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gm17555F6U8B9 371 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Casp2P29594 452 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Wfs1P56695 890 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gpr85P60894 370 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Smad1P70340 465 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Frg1P97376 258 aaKnown RBP9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ppp1r7Q3UM45 361 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Bpifb5Q3UQ05 490 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Zbtb40Q6PCS8 1258 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Smim5Q8BT42 78 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Iffo1Q8BXL9 562 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gmcl1Q920G9 524 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Padi4Q9Z183 666 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 RalgapbQ8BQZ4 1484 aa9.96□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Camta1A2A891 1682 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 PtprvP70289 1705 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 TsksO54887 585 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Cap1P40124 474 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 ArntP53762 791 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mc4rP56450 332 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Sema4aQ62178 760 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Arhgap30Q640N3 1101 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Znf512Q69Z99 562 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Sec23ipQ6NZC7 998 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slitrk5Q810B7 957 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Nob1Q8BW10 403 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zbtb9Q8CDC7 459 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 TrhdeQ8K093 1025 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Erich5Q8K0S2 362 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Spats2Q8K1N4 545 aaKnown RBP9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rnf8Q8VC56 488 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Iqca1Q9CUL5 857 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dbn1Q9QXS6 706 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 RpgrQ9R0X5 1001 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Siglec1Q62230 1695 aa9.96□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Ttll8A4Q9F1 832 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Trim34bJ3QNR8 485 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dnase1l3O55070 310 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 RngttO55236 597 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pdia4P08003 638 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Padi2Q08642 673 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Eif3j1Q3UGC7 261 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lasp1Q61792 263 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Azgp1Q64726 307 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Eif3j2Q66JS6 263 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Znf280cQ6P3Y5 742 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Galnt7Q80VA0 657 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Fermt2Q8CIB5 680 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Sbk1Q8QZX0 417 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Q91Z58 1206 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Pard3bQ9CSB4 1203 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Stx12Q9ER00 274 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Abca14E9Q8F8 1683 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lrp6O88572 1613 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Slc6a21A0A1B0GSD2 748 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 F6Y6L6 278 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dcdc2bF7BCK0 340 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Zfpm1O35615 995 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 EomesO54839 707 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Srpk1O70551 648 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 NppaP05125 152 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Lta4hP24527 611 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Dsc3P55850 896 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tuba1cP68373 449 aaKnown RBP9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Spatc1Q148B6 480 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 RilpQ5ND29 369 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Naif1Q6PFD7 327 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tacc1Q6Y685 774 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Carnmt1Q80UY1 400 aa9.95□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Rab3il1Q8VDV3 383 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms