RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Filip1Q9CS72 1211 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mss51Q9D5Z5 446 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mbtps1Q9WTZ2 1052 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mtmr1Q9Z2C4 669 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Plxnb3Q9QY40 1902 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Dnajc25A2ALW5 357 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Gm20503G3UZK1 150 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 PtprcP06800 1291 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Hspa8P63017 646 aaKnown RBP16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Foxn3Q499D0 457 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 E2f8Q58FA4 860 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Krt14Q61781 484 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Exoc3Q6KAR6 755 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Rexo1Q7TT28 1213 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ppme1Q8BVQ5 386 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Calhm6Q8C9E8 313 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 HyiQ8R1F5 277 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Luzp1Q8R4U7 1068 aaKnown RBP16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Psmd2Q8VDM4 908 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mtmr14Q8VEL2 648 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Pqbp1Q91VJ5 263 aaKnown RBP16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 CtsqQ91ZF4 343 aa16.31■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Smim10l2aA0A0B4J1F8 78 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 StrnO55106 780 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Apba3O88888 571 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 RarbP22605 482 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Epb41l4aP52963 686 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Fgfr4Q03142 799 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ccdc85aQ5SP85 500 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Fscn1Q61553 493 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Arrdc3Q7TPQ9 414 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Sdccag8Q80UF4 717 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Sestd1Q80UK0 696 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Trmt13Q8BYH3 481 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Vmn1r191Q8K4D0 298 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tor1aip1Q921T2 595 aaKnown RBP16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 MymkQ9D1N4 221 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Lrp2bpQ9D4C6 346 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ccdc105Q9D4K7 499 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 PpihQ9D868 188 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Baiap2l1Q9DBJ3 514 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tbx18Q9EPZ6 613 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Dctpp1Q9QY93 170 aa16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Maged1Q9QYH6 775 aaKnown RBP16.3■□□□□ 0.2
Ercc1-201ENSMUST00000003645 SktA2AQ25 1946 aaKnown RBP16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Zdbf2Q5SS00 2493 aaKnown RBP16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Gm45194A0A140LJG2 572 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Zfp984A2A7A2 547 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Apol10bG3X9K7 334 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cyp27b1O35084 507 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Sptlc1O35704 473 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Hsp90aa1P07901 733 aaKnown RBP16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Gjb1P28230 283 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Samsn1P57725 372 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ssrp1Q08943 708 aaKnown RBP16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Kmt5aQ2YDW7 349 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Acot10Q32MW3 439 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mphosph8Q3TYA6 858 aaKnown RBP16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Usp13Q5BKP2 858 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Herc4Q6PAV2 1057 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Kiaa0391Q8JZY4 584 aaKnown RBP16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Iqsec1Q8R0S2 961 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tmco4Q91WU4 631 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Haus2Q9CQS9 234 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mia3Q8BI84 1930 aa16.29■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Lrrc38A2VDH3 298 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Gm4307E9PZY4 289 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Gm4312K9J7E2 289 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Hmx1O70218 332 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cyp2f2P33267 491 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Man1a2P39098 641 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 PuraP42669 321 aaKnown RBP16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 MafP54843 370 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 GaaP70699 953 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Nlrp4cQ3TKR3 982 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cacna2d4Q5RJF7 1116 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 NostrinQ6WKZ7 506 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Asnsd1Q8BFS9 627 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cwf19l2Q8BG79 887 aaKnown RBP16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tnfsf13bQ9WU72 309 aa16.28■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Slc6a16A0A1L1SR47 742 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cul4bA2A432 970 aaKnown RBP16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 E030030I06RikJ3QML9 246 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Guca2bO09051 106 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mtco1P00397 514 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 P4hbP09103 509 aaKnown RBP16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 PpardP35396 440 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mgat3Q10470 538 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ric8aQ3TIR3 530 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 MaeaQ4VC33 396 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Sema5bQ60519 1093 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tcf12Q61286 706 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ahcyl2Q68FL4 613 aaKnown RBP16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Isy1Q69ZQ2 285 aaKnown RBP16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 IgflQ6B9Z0 140 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Adck2Q6NSR3 617 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Atp6v0d2Q80SY3 350 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Setdb2Q8C267 713 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Podxl2Q8CAE9 603 aa16.27■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Stoml1Q8CI66 399 aa16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms