RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W TPS2P31688 896 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W SIP1P32578 815 aa3.43□□□□□ -1.86
LCB5YLR260W SPR1P32603 445 aa3.43□□□□□ -1.86
LCB5YLR260W CYM1P32898 989 aa3.43□□□□□ -1.86
LCB5YLR260W MNN2P38069 597 aa3.43□□□□□ -1.86
LCB5YLR260W URA8P38627 578 aaPredicted RBP3.43□□□□□ -1.86
LCB5YLR260W DSN1P40568 576 aa3.43□□□□□ -1.86
LCB5YLR260W SNG1P46950 547 aa3.43□□□□□ -1.86
LCB5YLR260W YHC3P47040 408 aa3.43□□□□□ -1.86
LCB5YLR260W URB2P47108 1174 aa3.43□□□□□ -1.86
LCB5YLR260W HAM1P47119 197 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W BRO1P48582 844 aa3.43□□□□□ -1.86
LCB5YLR260W STR3P53101 465 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W YIP5P53108 310 aa3.43□□□□□ -1.86
LCB5YLR260W BET4Q00618 327 aa3.43□□□□□ -1.86
LCB5YLR260W SKO1Q02100 647 aa3.43□□□□□ -1.86
LCB5YLR260W ECM11Q04110 302 aa3.43□□□□□ -1.86
LCB5YLR260W GIM5Q04493 163 aa3.43□□□□□ -1.86
LCB5YLR260W RTT103Q05543 409 aa3.43□□□□□ -1.86
LCB5YLR260W YPR078CQ06813 372 aa3.43□□□□□ -1.86
LCB5YLR260W MED7Q08278 222 aa3.43□□□□□ -1.86
LCB5YLR260W NRT1Q08485 598 aa3.43□□□□□ -1.86
LCB5YLR260W GET4Q12125 312 aa3.43□□□□□ -1.86
LCB5YLR260W TUB3P09734 445 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W DSF1P0CX08 502 aa3.43□□□□□ -1.86
LCB5YLR260W YNR073CP0CX09 502 aa3.43□□□□□ -1.86
LCB5YLR260W CDC23P16522 626 aa3.43□□□□□ -1.86
LCB5YLR260W ARF2P19146 181 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W PHO13P19881 312 aa3.43□□□□□ -1.86
LCB5YLR260W IMP3P32899 183 aaPredicted RBP3.43□□□□□ -1.86
LCB5YLR260W GDH2P33327 1092 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W NUF2P33895 451 aa3.43□□□□□ -1.86
LCB5YLR260W HRB1P38922 454 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
LCB5YLR260W RCY1P39531 840 aa3.43□□□□□ -1.86
LCB5YLR260W SNZ3P43545 298 aa3.43□□□□□ -1.86
LCB5YLR260W BIT61P47041 543 aa3.43□□□□□ -1.86
LCB5YLR260W MPS3P47069 682 aa3.43□□□□□ -1.86
LCB5YLR260W AMA1P50082 593 aa3.43□□□□□ -1.86
LCB5YLR260W COS12P53053 380 aa3.43□□□□□ -1.86
LCB5YLR260W SNZ2P53824 298 aa3.43□□□□□ -1.86
LCB5YLR260W TDA7P53882 636 aaPredicted RBP3.43□□□□□ -1.86
LCB5YLR260W IMP4P53941 290 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W MTG1Q03151 367 aaPredicted RBP3.43□□□□□ -1.86
LCB5YLR260W CAB5Q03941 241 aa3.43□□□□□ -1.86
LCB5YLR260W GPN3Q06543 272 aa3.43□□□□□ -1.86
LCB5YLR260W AIM39Q08223 395 aa3.43□□□□□ -1.86
LCB5YLR260W GPN2Q08726 347 aaPredicted RBP3.43□□□□□ -1.86
LCB5YLR260W VIK1Q12045 647 aa3.43□□□□□ -1.86
LCB5YLR260W YOR012WQ12351 137 aa3.43□□□□□ -1.86
LCB5YLR260W SRN2Q99176 213 aa3.43□□□□□ -1.86
LCB5YLR260W ARG4P04076 463 aaPredicted RBP3.42□□□□□ -1.86
LCB5YLR260W ILV2P07342 687 aaKnown RBP3.42□□□□□ -1.86
LCB5YLR260W MET16P18408 261 aaPredicted RBP3.42□□□□□ -1.86
LCB5YLR260W MGR1P25573 417 aa3.42□□□□□ -1.86
LCB5YLR260W ZIP1P31111 875 aa3.42□□□□□ -1.86
LCB5YLR260W SRB5P32585 307 aa3.42□□□□□ -1.86
LCB5YLR260W FMO1P38866 432 aa3.42□□□□□ -1.86
LCB5YLR260W SAK1P38990 1142 aa3.42□□□□□ -1.86
LCB5YLR260W FMC1P40491 155 aa3.42□□□□□ -1.86
LCB5YLR260W IPI3P53877 555 aa3.42□□□□□ -1.86
LCB5YLR260W SLT2Q00772 484 aa3.42□□□□□ -1.86
LCB5YLR260W YMR206WQ03695 313 aa3.42□□□□□ -1.86
LCB5YLR260W MUS81Q04149 632 aaPredicted RBP3.42□□□□□ -1.86
LCB5YLR260W YMR130WQ04223 302 aa3.42□□□□□ -1.86
LCB5YLR260W RRG8Q06109 277 aa3.42□□□□□ -1.86
LCB5YLR260W PDR8Q06149 701 aa3.42□□□□□ -1.86
LCB5YLR260W COS7Q07788 383 aa3.42□□□□□ -1.86
LCB5YLR260W BSC6Q08280 497 aa3.42□□□□□ -1.86
LCB5YLR260W PER33Q12144 273 aa3.42□□□□□ -1.86
LCB5YLR260W RIB2Q12362 591 aaKnown RBP3.42□□□□□ -1.86
LCB5YLR260W FMP16Q12497 93 aa3.42□□□□□ -1.86
LCB5YLR260W YOS9Q99220 542 aa3.42□□□□□ -1.86
LCB5YLR260W DFG16Q99234 619 aa3.42□□□□□ -1.86
LCB5YLR260W SEC12P11655 471 aa3.42□□□□□ -1.86
LCB5YLR260W RSM22P36056 628 aa3.42□□□□□ -1.86
LCB5YLR260W UTH1P36135 365 aa3.42□□□□□ -1.86
LCB5YLR260W MAL32P38158 584 aa3.42□□□□□ -1.86
LCB5YLR260W VHS2P40463 436 aa3.42□□□□□ -1.86
LCB5YLR260W STB2P46679 850 aa3.42□□□□□ -1.86
LCB5YLR260W VOA1P53262 265 aa3.42□□□□□ -1.86
LCB5YLR260W MAL12P53341 584 aa3.42□□□□□ -1.86
LCB5YLR260W ENT5Q03769 411 aaKnown RBP3.42□□□□□ -1.86
LCB5YLR260W RRP45Q05636 305 aaKnown RBP3.42□□□□□ -1.86
LCB5YLR260W CTS2Q06350 511 aa3.42□□□□□ -1.86
LCB5YLR260W THI20Q08224 551 aa3.42□□□□□ -1.86
LCB5YLR260W CRT10Q08226 957 aa3.42□□□□□ -1.86
LCB5YLR260W RDR1Q08904 546 aa3.42□□□□□ -1.86
LCB5YLR260W LEU4P06208 619 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W PDE2P06776 526 aa3.41□□□□□ -1.86
LCB5YLR260W ERG20P08524 352 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W KIN2P13186 1147 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W YIM1P28625 365 aa3.41□□□□□ -1.86
LCB5YLR260W SEC1P30619 724 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W ATP11P32453 318 aa3.41□□□□□ -1.86
LCB5YLR260W PDB1P32473 366 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W ZUO1P32527 433 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W SGE1P33335 543 aa3.41□□□□□ -1.86
LCB5YLR260W MRPL10P36520 322 aa3.41□□□□□ -1.86
LCB5YLR260W YJL193WP39542 402 aa3.41□□□□□ -1.86
LCB5YLR260W EDC3P39998 551 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms