RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C RHO5P53879 331 aaKnown RBP1.56□□□□□ -2.16
RTR1YER139C MTQ1P53944 314 aa1.56□□□□□ -2.16
RTR1YER139C GPI15P53961 229 aa1.56□□□□□ -2.16
RTR1YER139C YPL107WQ02873 248 aa1.56□□□□□ -2.16
RTR1YER139C DCS1Q06151 350 aa1.56□□□□□ -2.16
RTR1YER139C SMF3Q12078 473 aaPredicted RBP1.56□□□□□ -2.16
RTR1YER139C BUG1Q12191 341 aa1.56□□□□□ -2.16
RTR1YER139C RMD5Q12508 421 aa1.56□□□□□ -2.16
RTR1YER139C ISN1Q99312 450 aa1.56□□□□□ -2.16
RTR1YER139C PDX1P16451 410 aa1.55□□□□□ -2.16
RTR1YER139C RPC53P25441 422 aa1.55□□□□□ -2.16
RTR1YER139C GEX1P25596 615 aa1.55□□□□□ -2.16
RTR1YER139C DBF4P32325 704 aa1.55□□□□□ -2.16
RTR1YER139C YBR056WP38081 501 aa1.55□□□□□ -2.16
RTR1YER139C YAL037WP39728 267 aa1.55□□□□□ -2.16
RTR1YER139C SEC9P40357 651 aa1.55□□□□□ -2.16
RTR1YER139C ZIM17P42844 174 aa1.55□□□□□ -2.16
RTR1YER139C BIR1P47134 954 aa1.55□□□□□ -2.16
RTR1YER139C YGL262WP53054 175 aa1.55□□□□□ -2.16
RTR1YER139C YIP5P53108 310 aa1.55□□□□□ -2.16
RTR1YER139C OCA2P53949 197 aa1.55□□□□□ -2.16
RTR1YER139C TPS1Q00764 495 aaKnown RBP1.55□□□□□ -2.16
RTR1YER139C NUP116Q02630 1113 aa1.55□□□□□ -2.16
RTR1YER139C HOT1Q03213 719 aa1.55□□□□□ -2.16
RTR1YER139C TAF12Q03761 539 aa1.55□□□□□ -2.16
RTR1YER139C ACL4Q03771 387 aa1.55□□□□□ -2.16
RTR1YER139C ERB1Q04660 807 aaKnown RBP1.55□□□□□ -2.16
RTR1YER139C BCH1Q05029 724 aa1.55□□□□□ -2.16
RTR1YER139C YPR195CQ06594 109 aa1.55□□□□□ -2.16
RTR1YER139C ISA2Q12425 185 aa1.55□□□□□ -2.16
RTR1YER139C CLB1P24868 471 aa1.54□□□□□ -2.16
RTR1YER139C RAD57P25301 460 aa1.54□□□□□ -2.16
RTR1YER139C URA7P28274 579 aaKnown RBP1.54□□□□□ -2.16
RTR1YER139C PRY2P36110 329 aa1.54□□□□□ -2.16
RTR1YER139C SLM4P38247 162 aa1.54□□□□□ -2.16
RTR1YER139C YER184CP39961 794 aa1.54□□□□□ -2.16
RTR1YER139C JLP2P40206 208 aa1.54□□□□□ -2.16
RTR1YER139C CAK1P43568 368 aaPredicted RBP1.54□□□□□ -2.16
RTR1YER139C YFL012WP43580 148 aa1.54□□□□□ -2.16
RTR1YER139C SFH5P47008 294 aa1.54□□□□□ -2.16
RTR1YER139C RPT4P53549 437 aaKnown RBP1.54□□□□□ -2.16
RTR1YER139C CCE1Q03702 353 aa1.54□□□□□ -2.16
RTR1YER139C YDR131CQ03899 556 aa1.54□□□□□ -2.16
RTR1YER139C MMR1Q06324 491 aa1.54□□□□□ -2.16
RTR1YER139C ARO3P14843 370 aaKnown RBP1.53□□□□□ -2.16
RTR1YER139C YCL068CP25593 260 aa1.53□□□□□ -2.16
RTR1YER139C PRR1P28708 518 aa1.53□□□□□ -2.16
RTR1YER139C PTK1P36002 662 aaPredicted RBP1.53□□□□□ -2.16
RTR1YER139C ATP3P38077 311 aaKnown RBP1.53□□□□□ -2.16
RTR1YER139C OM14P38325 134 aa1.53□□□□□ -2.16
RTR1YER139C YIL029CP40538 142 aa1.53□□□□□ -2.16
RTR1YER139C PIB2P53191 635 aa1.53□□□□□ -2.16
RTR1YER139C RMT2Q03305 412 aa1.53□□□□□ -2.16
RTR1YER139C YET2Q04210 160 aa1.53□□□□□ -2.16
RTR1YER139C RIF2Q06208 395 aa1.53□□□□□ -2.16
RTR1YER139C SRL2Q12020 392 aa1.53□□□□□ -2.16
RTR1YER139C AEP3Q12089 606 aa1.53□□□□□ -2.16
RTR1YER139C MED2Q12124 431 aa1.53□□□□□ -2.16
RTR1YER139C TPT1Q12272 230 aaKnown RBP1.53□□□□□ -2.16
RTR1YER139C ATG34Q12292 412 aa1.53□□□□□ -2.16
RTR1YER139C MTR10Q99189 972 aa1.53□□□□□ -2.16
RTR1YER139C COX3P00420 269 aa1.52□□□□□ -2.17
RTR1YER139C ADE4P04046 510 aaKnown RBP1.52□□□□□ -2.17
RTR1YER139C IMA3P0CW40 589 aa1.52□□□□□ -2.17
RTR1YER139C IMA4P0CW41 589 aa1.52□□□□□ -2.17
RTR1YER139C CPR2P23285 205 aa1.52□□□□□ -2.17
RTR1YER139C RIM1P32445 135 aaKnown RBP1.52□□□□□ -2.17
RTR1YER139C HEL1P36113 551 aa1.52□□□□□ -2.17
RTR1YER139C SBE22P38814 852 aa1.52□□□□□ -2.17
RTR1YER139C COX14P39103 70 aa1.52□□□□□ -2.17
RTR1YER139C YER079WP40052 210 aaKnown RBP1.52□□□□□ -2.17
RTR1YER139C SER3P40054 469 aa1.52□□□□□ -2.17
RTR1YER139C STD1Q02794 444 aa1.52□□□□□ -2.17
RTR1YER139C MMT1Q03218 510 aa1.52□□□□□ -2.17
RTR1YER139C URH1Q04179 340 aa1.52□□□□□ -2.17
RTR1YER139C SNT309Q06091 175 aaPredicted RBP1.52□□□□□ -2.17
RTR1YER139C RRP9Q06506 573 aaKnown RBP1.52□□□□□ -2.17
RTR1YER139C MCH1Q07376 486 aa1.52□□□□□ -2.17
RTR1YER139C IMA2Q08295 589 aa1.52□□□□□ -2.17
RTR1YER139C NCA2Q12374 616 aa1.52□□□□□ -2.17
RTR1YER139C MDH1P17505 334 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
RTR1YER139C EXG1P23776 448 aaKnown RBP1.51□□□□□ -2.17
RTR1YER139C CDC50P25656 391 aa1.51□□□□□ -2.17
RTR1YER139C RRP1P35178 278 aaPredicted RBP1.51□□□□□ -2.17
RTR1YER139C MRPL27P36526 146 aaPredicted RBP1.51□□□□□ -2.17
RTR1YER139C ASC1P38011 319 aaKnown RBP1.51□□□□□ -2.17
RTR1YER139C GPI18P38211 433 aa1.51□□□□□ -2.17
RTR1YER139C ZTA1P38230 334 aaKnown RBP1.51□□□□□ -2.17
RTR1YER139C GAT2P40209 560 aa1.51□□□□□ -2.17
RTR1YER139C VHS2P40463 436 aa1.51□□□□□ -2.17
RTR1YER139C YFR057WP43625 151 aa1.51□□□□□ -2.17
RTR1YER139C TCB2P48231 1178 aa1.51□□□□□ -2.17
RTR1YER139C MRM2P53123 320 aa1.51□□□□□ -2.17
RTR1YER139C YGR111WP53265 400 aa1.51□□□□□ -2.17
RTR1YER139C YLR345WQ06137 509 aa1.51□□□□□ -2.17
RTR1YER139C DCI1Q08558 271 aa1.51□□□□□ -2.17
RTR1YER139C RAX1Q08760 435 aa1.51□□□□□ -2.17
RTR1YER139C SMC6Q12749 1114 aa1.51□□□□□ -2.17
RTR1YER139C PDE2P06776 526 aa1.5□□□□□ -2.17
RTR1YER139C CDC21P06785 304 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms