RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C COG4Q06096 861 aa2.07□□□□□ -2.08
ASM4YDL088C LOT6Q07923 191 aa2.07□□□□□ -2.08
ASM4YDL088C DIS3Q08162 1001 aaKnown RBP2.07□□□□□ -2.08
ASM4YDL088C PIS1P06197 220 aaKnown RBP2.06□□□□□ -2.08
ASM4YDL088C ZRC1P20107 442 aa2.06□□□□□ -2.08
ASM4YDL088C PFS1P38872 237 aa2.06□□□□□ -2.08
ASM4YDL088C PFS2P42841 465 aaKnown RBP2.06□□□□□ -2.08
ASM4YDL088C IGD1P43598 195 aa2.06□□□□□ -2.08
ASM4YDL088C ATP22P50273 684 aaPredicted RBP2.06□□□□□ -2.08
ASM4YDL088C HST1P53685 503 aa2.06□□□□□ -2.08
ASM4YDL088C HOT1Q03213 719 aa2.06□□□□□ -2.08
ASM4YDL088C TDA1Q03533 586 aa2.06□□□□□ -2.08
ASM4YDL088C RRP9Q06506 573 aaKnown RBP2.06□□□□□ -2.08
ASM4YDL088C RFM1Q12192 310 aa2.06□□□□□ -2.08
ASM4YDL088C EXG1P23776 448 aaKnown RBP2.06□□□□□ -2.08
ASM4YDL088C YME2P32843 850 aa2.06□□□□□ -2.08
ASM4YDL088C YHK8P38776 514 aa2.06□□□□□ -2.08
ASM4YDL088C PTI1P39927 425 aaPredicted RBP2.06□□□□□ -2.08
ASM4YDL088C PGU1P47180 361 aa2.06□□□□□ -2.08
ASM4YDL088C MRPL19P53875 158 aa2.06□□□□□ -2.08
ASM4YDL088C NCA2Q12374 616 aa2.06□□□□□ -2.08
ASM4YDL088C RTN2Q12443 393 aa2.06□□□□□ -2.08
ASM4YDL088C RAX2Q12465 1220 aa2.06□□□□□ -2.08
ASM4YDL088C HTZ1Q12692 134 aaKnown RBP2.06□□□□□ -2.08
ASM4YDL088C CAP2P13517 287 aa2.05□□□□□ -2.08
ASM4YDL088C ZUO1P32527 433 aaKnown RBP2.05□□□□□ -2.08
ASM4YDL088C ANR2P36090 516 aaPredicted RBP2.05□□□□□ -2.08
ASM4YDL088C ALD5P40047 520 aaKnown RBP2.05□□□□□ -2.08
ASM4YDL088C IRC6P43615 237 aa2.05□□□□□ -2.08
ASM4YDL088C SKO1Q02100 647 aa2.05□□□□□ -2.08
ASM4YDL088C PRM6Q04705 352 aa2.05□□□□□ -2.08
ASM4YDL088C MFG1Q07684 458 aa2.05□□□□□ -2.08
ASM4YDL088C YOL159C-AQ3E769 90 aa2.05□□□□□ -2.08
ASM4YDL088C IMA3P0CW40 589 aa2.04□□□□□ -2.08
ASM4YDL088C IMA4P0CW41 589 aa2.04□□□□□ -2.08
ASM4YDL088C GEX1P25596 615 aa2.04□□□□□ -2.08
ASM4YDL088C DTR1P38125 572 aa2.04□□□□□ -2.08
ASM4YDL088C STP2P38704 541 aa2.04□□□□□ -2.08
ASM4YDL088C RRP46P53256 223 aaPredicted RBP2.04□□□□□ -2.08
ASM4YDL088C YGR250CP53316 781 aaKnown RBP2.04□□□□□ -2.08
ASM4YDL088C SKI8Q02793 397 aaPredicted RBP2.04□□□□□ -2.08
ASM4YDL088C STD1Q02794 444 aa2.04□□□□□ -2.08
ASM4YDL088C URH1Q04179 340 aa2.04□□□□□ -2.08
ASM4YDL088C IMA2Q08295 589 aa2.04□□□□□ -2.08
ASM4YDL088C TY1B-AO13527 1196 aaKnown RBP2.03□□□□□ -2.08
ASM4YDL088C MRPL27P36526 146 aaPredicted RBP2.03□□□□□ -2.08
ASM4YDL088C TOS3P43637 560 aa2.03□□□□□ -2.08
ASM4YDL088C MMT1Q03218 510 aa2.03□□□□□ -2.08
ASM4YDL088C BUD21Q08492 214 aaPredicted RBP2.03□□□□□ -2.08
ASM4YDL088C CEX1Q12453 761 aa2.03□□□□□ -2.08
ASM4YDL088C RED1P14291 827 aa2.02□□□□□ -2.09
ASM4YDL088C URA4P20051 364 aa2.02□□□□□ -2.09
ASM4YDL088C REC107P21651 314 aa2.02□□□□□ -2.09
ASM4YDL088C DEP1P31385 405 aa2.02□□□□□ -2.09
ASM4YDL088C PFF1P38244 976 aa2.02□□□□□ -2.09
ASM4YDL088C YLR345WQ06137 509 aa2.02□□□□□ -2.09
ASM4YDL088C YDL121CQ07541 149 aa2.02□□□□□ -2.09
ASM4YDL088C BRF1P29056 596 aa2.02□□□□□ -2.09
ASM4YDL088C YMR130WQ04223 302 aa2.02□□□□□ -2.09
ASM4YDL088C DCS1Q06151 350 aa2.02□□□□□ -2.09
ASM4YDL088C OCA2P53949 197 aa2.01□□□□□ -2.09
ASM4YDL088C KAP120Q02932 1032 aa2.01□□□□□ -2.09
ASM4YDL088C ARX1Q03862 593 aaKnown RBP2.01□□□□□ -2.09
ASM4YDL088C DON1Q05610 365 aa2.01□□□□□ -2.09
ASM4YDL088C SNT309Q06091 175 aaPredicted RBP2.01□□□□□ -2.09
ASM4YDL088C RRI2Q12348 645 aa2.01□□□□□ -2.09
ASM4YDL088C YCR024C-BQ3E7Z8 88 aa2.01□□□□□ -2.09
ASM4YDL088C YEF1P32622 495 aa2□□□□□ -2.09
ASM4YDL088C ECT1P33412 323 aa2□□□□□ -2.09
ASM4YDL088C WSS1P38838 269 aa2□□□□□ -2.09
ASM4YDL088C RPL21AQ02753 160 aaKnown RBP2□□□□□ -2.09
ASM4YDL088C RPL21BQ12672 160 aaKnown RBP2□□□□□ -2.09
ASM4YDL088C YRF1-4O13559 1382 aa2□□□□□ -2.09
ASM4YDL088C ADE4P04046 510 aaKnown RBP1.99□□□□□ -2.09
ASM4YDL088C ATP1P07251 545 aaKnown RBP1.99□□□□□ -2.09
ASM4YDL088C PUT4P15380 627 aa1.99□□□□□ -2.09
ASM4YDL088C RAD5P32849 1169 aaPredicted RBP1.99□□□□□ -2.09
ASM4YDL088C ECM8P38246 354 aa1.99□□□□□ -2.09
ASM4YDL088C WSC4P38739 605 aa1.99□□□□□ -2.09
ASM4YDL088C YER079WP40052 210 aaKnown RBP1.99□□□□□ -2.09
ASM4YDL088C AIP1P46680 615 aaKnown RBP1.99□□□□□ -2.09
ASM4YDL088C PIN3Q06449 215 aa1.99□□□□□ -2.09
ASM4YDL088C FCY22Q12119 530 aa1.99□□□□□ -2.09
ASM4YDL088C POM152P39685 1337 aa1.99□□□□□ -2.09
ASM4YDL088C MAS2P11914 482 aa1.98□□□□□ -2.09
ASM4YDL088C CMK2P22517 447 aa1.98□□□□□ -2.09
ASM4YDL088C PEX22P39718 180 aa1.98□□□□□ -2.09
ASM4YDL088C SPR6Q01684 191 aa1.98□□□□□ -2.09
ASM4YDL088C STE7P06784 515 aa1.98□□□□□ -2.09
ASM4YDL088C DST1P07273 309 aa1.98□□□□□ -2.09
ASM4YDL088C RPS19AP07280 144 aaKnown RBP1.98□□□□□ -2.09
ASM4YDL088C RPS19BP07281 144 aaPredicted RBP1.98□□□□□ -2.09
ASM4YDL088C TPS2P31688 896 aaKnown RBP1.98□□□□□ -2.09
ASM4YDL088C ERG3P32353 365 aa1.98□□□□□ -2.09
ASM4YDL088C SOL2P37262 315 aa1.98□□□□□ -2.09
ASM4YDL088C NOC2P39744 710 aaKnown RBP1.98□□□□□ -2.09
ASM4YDL088C MMF1P40185 145 aaKnown RBP1.98□□□□□ -2.09
ASM4YDL088C YPR195CQ06594 109 aa1.98□□□□□ -2.09
ASM4YDL088C TSR2Q06672 205 aaKnown RBP1.98□□□□□ -2.09
ASM4YDL088C SLF1Q12034 447 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms