RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	NUR1	Q12066	484 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	RPN5	Q12250	445 aa	Known RBP	4.15	□□□□□ -1.75
SAF1	YBR280C	YVC1	Q12324	675 aa		4.15	□□□□□ -1.75
SAF1	YBR280C	TRP3	P00937	484 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	MEF1	P25039	761 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	BUB2	P26448	306 aa	Predicted RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	YMR262W	P38430	313 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	YGP1	P38616	354 aa	Known RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	SCS2	P40075	244 aa	Known RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	FAR3	P46671	204 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	PRY1	P47032	299 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	YJR039W	P47107	1121 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	RPS12	P48589	143 aa	Known RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	HOS2	P53096	452 aa	Predicted RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	RPM2	Q02773	1202 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	SDC1	Q03323	175 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	PAL1	Q05518	499 aa	Known RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	RSA1	Q08932	381 aa		4.14	□□□□□ -1.75
SAF1	YBR280C	NOP14	Q99207	810 aa	Known RBP	4.14	□□□□□ -1.75
SAF1	YBR280C	FLP1	P03870	423 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	GPH1	P06738	902 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	PET111	P08468	800 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	RAD51	P25454	400 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	TDP1	P38319	544 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	PTH1	P38876	190 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	YMR144W	P40214	342 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	JEM1	P40358	645 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	REE1	P40893	198 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	URB2	P47108	1174 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	GTO1	P48239	356 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	YGR066C	P53242	292 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	NOP19	P53317	196 aa	Predicted RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	RNH70	P53331	553 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	GOR1	P53839	350 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	IDP3	P53982	420 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	TIM10	P87108	93 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	YDR124W	Q04608	324 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	ERB1	Q04660	807 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	HRI1	Q05905	244 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	VPS74	Q06385	345 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	TMA46	Q12000	345 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	NOP58	Q12499	511 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	YPR096C	O13587	100 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	CBP2	P03874	630 aa	Predicted RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	ATP4	P05626	244 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	CBP6	P07253	162 aa	Predicted RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	MET2	P08465	486 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	BAR1	P12630	587 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	KGD1	P20967	1014 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	RPI1	P23250	407 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	YEF1	P32622	495 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	CAT2	P32796	670 aa	Known RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	RIC1	P40395	1056 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	MRPS18	P42847	217 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	TAF6	P53040	516 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	YNR040W	P53736	256 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	ATG34	Q12292	412 aa		4.13	□□□□□ -1.75
SAF1	YBR280C	FOL3	Q12676	427 aa	Predicted RBP	4.13	□□□□□ -1.75
SAF1	YBR280C	ADE5,7	P07244	802 aa	Known RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	CTA1	P15202	515 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	PDA1	P16387	420 aa	Known RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	YAP1	P19880	650 aa	Known RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	AAR2	P32357	355 aa	Predicted RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	LOS1	P33418	1100 aa	Predicted RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	SEC31	P38968	1273 aa	Known RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	SEN34	P39707	275 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	GAT2	P40209	560 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	LYS12	P40495	371 aa	Known RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	PTR3	P43606	678 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	ECL1	P48235	211 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	MAL12	P53341	584 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	NCE101	Q02820	53 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	ECM11	Q04110	302 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	YDL121C	Q07541	149 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	SLF1	Q12034	447 aa	Known RBP	4.12	□□□□□ -1.75
SAF1	YBR280C	YDL211C	Q12121	372 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	Q0297	Q9ZZV8	51 aa		4.12	□□□□□ -1.75
SAF1	YBR280C	HEM3	P28789	327 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	CTS1	P29029	562 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	SEC17	P32602	292 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	YSC84	P32793	468 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	SHU2	P38957	223 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	ALG5	P40350	334 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	SEC26	P41810	973 aa	Known RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	ARC1	P46672	376 aa	Known RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	BIT61	P47041	543 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	LIA1	P47120	325 aa	Known RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	UBX4	P54730	416 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	YDR249C	Q03787	373 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	YMR310C	Q04867	317 aa	Predicted RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	COS7	Q07788	383 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	PFK27	Q12471	397 aa	Predicted RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	HTA2	P04912	132 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	HEM4	P06174	275 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	GAL3	P13045	520 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	NFS1	P25374	497 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	PBN1	P25580	416 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	CAF4	P36130	643 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	MGE1	P38523	228 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	STP2	P38704	541 aa		4.11	□□□□□ -1.75

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