RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SNX14Q9Y5W7 946 aa11.51□□□□□ -0.57
PHGDH-222ENST00000641587 ENPP3O14638 875 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 ATP9AO75110 1047 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 CYP21A2P08686 494 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 DNAJB1P25685 340 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 TCF7P36402 384 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 ANAPC15P60006 121 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 TROAPQ12815 778 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 BTG3Q14201 252 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 KRT32Q14532 448 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 DNAJB3Q8WWF6 145 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 CLP1Q92989 425 aaKnown RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 ZNF689Q96CS4 500 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 MYL10Q9BUA6 226 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 PKD2L1Q9P0L9 805 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 PCDHGC5Q9Y5F6 944 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 MRPL42Q9Y6G3 142 aaKnown RBP11.5□□□□□ -0.57
PHGDH-222ENST00000641587 PLXNA4Q9HCM2 1894 aa11.5□□□□□ -0.57
PHGDH-222ENST00000641587 MEIS2O14770 477 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 STAM2O75886 525 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 MMP1P03956 469 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 RB1P06400 928 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 KCNA2P16389 499 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 CD52P31358 61 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 GATMP50440 423 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 ANTXR2P58335 489 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 IGBP1P78318 339 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 SMAD4Q13485 552 aaKnown RBP11.49□□□□□ -0.57
PHGDH-222ENST00000641587 WTAPQ15007 396 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 GRIK4Q16099 956 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
PHGDH-222ENST00000641587 FBXO47Q5MNV8 452 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 MARCH8Q5T0T0 291 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 PCNX4Q63HM2 1172 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 SMARCC2Q8TAQ2 1214 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 JAKMIP1Q96N16 626 aaKnown RBP11.49□□□□□ -0.57
PHGDH-222ENST00000641587 LMAN2LQ9H0V9 348 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 TUBE1Q9UJT0 475 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
PHGDH-222ENST00000641587 GSTTP1A0A1W2PQM5 241 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 STXBP3O00186 592 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 DGKIO75912 1065 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 ITGB1P05556 798 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-222ENST00000641587 PSMA5P28066 241 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 NDUFV1P49821 464 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 TMEM62Q0P6H9 643 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 TRDNQ13061 729 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 COL9A3Q14050 684 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-222ENST00000641587 RABEP1Q15276 862 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 HERC4Q5GLZ8 1057 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-222ENST00000641587 TAF2Q6P1X5 1199 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 RALYLQ86SE5 291 aaKnown RBP11.48□□□□□ -0.57
PHGDH-222ENST00000641587 RTN4RL1Q86UN2 441 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-222ENST00000641587 PRSS33Q8NF86 280 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 KCNB2Q92953 911 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 FAM49AQ9H0Q0 323 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-222ENST00000641587 CD207Q9UJ71 328 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
PHGDH-222ENST00000641587 ERICH2A1L162 156 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 MBLAC1A4D2B0 266 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-222ENST00000641587 E7EWF7 191 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 NCK2O43639 380 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 PLEKHA8P1O95397 391 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 GLP2RO95838 553 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 ITGB5P18084 799 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 RBM10P98175 930 aaKnown RBP11.47□□□□□ -0.57
PHGDH-222ENST00000641587 TRAF1Q13077 416 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 ADAM15Q13444 863 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 UBE2SQ16763 222 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 IER5LQ5T953 404 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 TSHZ1Q6ZSZ6 1077 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 CMTR1Q8N1G2 835 aaKnown RBP11.47□□□□□ -0.57
PHGDH-222ENST00000641587 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 TRAPPC12Q8WVT3 735 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 MSLNLQ96KJ4 702 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 PCYT2Q99447 389 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 UPF3BQ9BZI7 483 aaKnown RBP11.47□□□□□ -0.57
PHGDH-222ENST00000641587 CLEC1BQ9P126 229 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-222ENST00000641587 RWDD3Q9Y3V2 267 aa11.47□□□□□ -0.57
PHGDH-222ENST00000641587 hCG_1642624A0A1W2PR95 340 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 RXRAP19793 462 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 NRIP1P48552 1158 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 MRPS6P82932 125 aaKnown RBP11.46□□□□□ -0.57
PHGDH-222ENST00000641587 BLOC1S2Q6QNY1 142 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 CATIPQ7Z7H3 387 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
PHGDH-222ENST00000641587 NLRX1Q86UT6 975 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.57
PHGDH-222ENST00000641587 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms