RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 RSPH3Q86UC2 560 aa16.13■□□□□ 0.17
SDHD-209ENST00000640554 PPP1R13LQ8WUF5 828 aa16.13■□□□□ 0.17
SDHD-209ENST00000640554 C8orf76Q96K31 380 aa16.13■□□□□ 0.17
SDHD-209ENST00000640554 PCYT2Q99447 389 aa16.13■□□□□ 0.17
SDHD-209ENST00000640554 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■■□□ 16.2
SDHD-209ENST00000640554 TEKT3Q9BXF9 490 aa16.13■□□□□ 0.17
SDHD-209ENST00000640554 DDX25Q9UHL0 483 aaKnown RBP16.13■□□□□ 0.17
SDHD-209ENST00000640554 UMODL1Q5DID0 1318 aa16.13■□□□□ 0.17
SDHD-209ENST00000640554 TRIOBPQ9H2D6 2365 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
SDHD-209ENST00000640554 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
SDHD-209ENST00000640554 HBP1O60381 514 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 JAK3P52333 1124 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 SMAD3P84022 425 aaKnown RBP16.12■□□□□ 0.17
SDHD-209ENST00000640554 GRIK4Q16099 956 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
SDHD-209ENST00000640554 LETM2Q2VYF4 491 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 RASIP1Q5U651 963 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 LRCH2Q5VUJ6 765 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 LRRC8DQ7L1W4 858 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 DIS3L2Q8IYB7 885 aaKnown RBP16.12■□□□□ 0.17
SDHD-209ENST00000640554 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 DHX38Q92620 1227 aaKnown RBP16.12■□□□□ 0.17
SDHD-209ENST00000640554 SCLYQ96I15 445 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 ZNF302Q9NR11 478 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 GJB4Q9NTQ9 266 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 TELO2Q9Y4R8 837 aa16.12■□□□□ 0.17
SDHD-209ENST00000640554 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 POTEB3A0JP26 581 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 MBLAC1A4D2B0 266 aaPredicted RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 DDX39AO00148 427 aaKnown RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 TREHO43280 583 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 PSMD10O75832 226 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 BAG4O95429 457 aaKnown RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 TDP2O95551 362 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 ACRP10323 421 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 INSRRP14616 1297 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 PLCB4Q15147 1175 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 SWSAP1Q6NVH7 229 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 PDXDC2PQ6P474 469 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 POTEBQ6S5H4 581 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 FAM43BQ6ZT52 329 aaPredicted RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 TNFRSF25Q93038 417 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 FAM167AQ96KS9 214 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 FOXP1Q9H334 677 aaPredicted RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 DISC1Q9NRI5 854 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
SDHD-209ENST00000640554 MAFBQ9Y5Q3 323 aaPredicted RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
SDHD-209ENST00000640554 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 RSPH10B2B2RC85 870 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
SDHD-209ENST00000640554 EFCAB14O75071 495 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 BAIAP3O94812 1187 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 CXCL10P02778 98 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 RSPH10BP0C881 870 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 MARK3P27448 753 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 THPOP40225 353 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 NR5A1Q13285 461 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 HIC1Q14526 733 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 ZNF484Q5JVG2 852 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 SLFN12Q8IYM2 578 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 BBXQ8WY36 941 aaPredicted RBP16.1■□□□□ 0.17
SDHD-209ENST00000640554 TMX3Q96JJ7 454 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
SDHD-209ENST00000640554 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 TUBE1Q9UJT0 475 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 COL1A2P08123 1366 aa16.1■□□□□ 0.17
SDHD-209ENST00000640554 MARCH6O60337 910 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 DKC1O60832 514 aaKnown RBP eCLIP16.09■□□□□ 0.17
SDHD-209ENST00000640554 ORC2Q13416 577 aaPredicted RBP16.09■□□□□ 0.17
SDHD-209ENST00000640554 FAM26DQ5JW98 314 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
SDHD-209ENST00000640554 NME8Q8N427 588 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 NRBP2Q9NSY0 501 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 PCDH10Q9P2E7 1040 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.09■□□□□ 0.17
SDHD-209ENST00000640554 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
SDHD-209ENST00000640554 TMEM265A0A087WTH1 108 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 SOX1O00570 391 aaPredicted RBP16.08■□□□□ 0.16
SDHD-209ENST00000640554 PPP2R5CQ13362 524 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 MARCH8Q5T0T0 291 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 CNKSR3Q6P9H4 555 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 B3GNT9Q6UX72 402 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 DEFB128Q7Z7B8 93 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 CKAP2LQ8IYA6 745 aa16.08■□□□□ 0.16
SDHD-209ENST00000640554 ZNF710Q8N1W2 664 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms