RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 MGAT3Q09327 533 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 TMEM62Q0P6H9 643 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 AP3B2Q13367 1082 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 PLCB4Q15147 1175 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 FBXL16Q8N461 479 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 ZNF713Q8N859 430 aaPredicted RBP18.67■□□□□ 0.58
COLCA2-207ENST00000639470 GJA10Q969M2 543 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 ERAP1Q9NZ08 941 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 TUBE1Q9UJT0 475 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 EMSYQ7Z589 1322 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 NRCAMQ92823 1304 aa18.67■□□□□ 0.58
COLCA2-207ENST00000639470 MYO9BQ13459 2157 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 DHX15O43143 795 aaKnown RBP18.66■□□□□ 0.58
COLCA2-207ENST00000639470 LPXNO60711 386 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 UPP2O95045 317 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 PARNO95453 639 aaKnown RBP18.66■□□□□ 0.58
COLCA2-207ENST00000639470 EVCP57679 992 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 GRB10Q13322 594 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 CCDC60Q8IWA6 550 aaPredicted RBP18.66■□□□□ 0.58
COLCA2-207ENST00000639470 SDF4Q9BRK5 362 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 SMARCAD1Q9H4L7 1026 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 PPP4R2Q9NY27 417 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 TRPC6Q9Y210 931 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 MTCH2Q9Y6C9 303 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 NFASCO94856 1347 aa18.66■□□□□ 0.58
COLCA2-207ENST00000639470 ESYT2A0FGR8 921 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 MBLAC1A4D2B0 266 aaPredicted RBP18.65■□□□□ 0.58
COLCA2-207ENST00000639470 LINC01553A4QN01 128 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 KIF28PB7ZC32 967 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 GNAT1P11488 350 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 IFNAR1P17181 557 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 TFF2Q03403 129 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 LPIN1Q14693 890 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 FAM26DQ5JW98 314 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 TRMT1LQ7Z2T5 733 aaKnown RBP18.65■□□□□ 0.58
COLCA2-207ENST00000639470 REXO1Q8N1G1 1221 aaKnown RBP18.65■□□□□ 0.58
COLCA2-207ENST00000639470 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 CDY2AQ9Y6F7 541 aa18.65■□□□□ 0.58
COLCA2-207ENST00000639470 MAFGO15525 162 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 ATP4AP20648 1035 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 SEPT8Q92599 483 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 LENG9Q96B70 501 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 RAD9AQ99638 391 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 RNF26Q9BY78 433 aaPredicted RBP18.64■□□□□ 0.57
COLCA2-207ENST00000639470 IFIH1Q9BYX4 1025 aaKnown RBP18.64■□□□□ 0.57
COLCA2-207ENST00000639470 AGO3Q9H9G7 860 aaKnown RBP18.64■□□□□ 0.57
COLCA2-207ENST00000639470 C6orf50Q9HD87 102 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 GJB4Q9NTQ9 266 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 CYP46A1Q9Y6A2 500 aa18.64■□□□□ 0.57
COLCA2-207ENST00000639470 ATG7O95352 703 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 CYP3A4P08684 503 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 STAT5BP51692 787 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 AKAP17AQ02040 695 aaKnown RBP18.63■□□□□ 0.57
COLCA2-207ENST00000639470 PRR16Q569H4 304 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 ABHD15Q6UXT9 468 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 LINC01599Q8WXQ3 324 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 AZI2Q9H6S1 392 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 PDRG1Q9NUG6 133 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 COL4A4P53420 1690 aaPredicted RBP18.63■□□□□ 0.57
COLCA2-207ENST00000639470 SIP14410 1827 aa18.63■□□□□ 0.57
COLCA2-207ENST00000639470 VCANP13611 3396 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 IGKV6D-21A0A0A0MT36 114 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 IPO5O00410 1097 aaKnown RBP18.62■□□□□ 0.57
COLCA2-207ENST00000639470 BACH1O14867 736 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 CAND2O75155 1236 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 AMHP03971 560 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 NPY5RQ15761 445 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 SWSAP1Q6NVH7 229 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 ZNF577Q9BSK1 485 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 SUGCTQ9HAC7 445 aa18.62■□□□□ 0.57
COLCA2-207ENST00000639470 POTEB3A0JP26 581 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 ZBTB42B2RXF5 422 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 CD52P31358 61 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 NLRP5P59047 1200 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 MRPS6P82932 125 aaKnown RBP18.61■□□□□ 0.57
COLCA2-207ENST00000639470 SKIV2LQ15477 1246 aaKnown RBP18.61■□□□□ 0.57
COLCA2-207ENST00000639470 FBXO47Q5MNV8 452 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 TAF2Q6P1X5 1199 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 POTEBQ6S5H4 581 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 NIPA1Q7RTP0 329 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 TM6SF1Q9BZW5 370 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 CDHR5Q9HBB8 845 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 THEGQ9P2T0 379 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 TPCN1Q9ULQ1 816 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 KCNJ14Q9UNX9 436 aa18.61■□□□□ 0.57
COLCA2-207ENST00000639470 PRRC2BQ5JSZ5 2229 aaKnown RBP18.61■□□□□ 0.57
COLCA2-207ENST00000639470 LARGE1O95461 756 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 SEC24BO95487 1268 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 ERVK-21P61565 698 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 HTRA4P83105 476 aaPredicted RBP18.6■□□□□ 0.57
COLCA2-207ENST00000639470 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
COLCA2-207ENST00000639470 SCRN1Q12765 414 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 MTHFD1LQ6UB35 978 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 PLPPR4Q7Z2D5 763 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 RPAINQ86UA6 219 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 TOP1MTQ969P6 601 aa18.6■□□□□ 0.57
COLCA2-207ENST00000639470 NECAB3Q96P71 396 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms