RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 SHC4Q6S5L8 630 aa10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 CCDC117Q8IWD4 279 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 SHTN1A0MZ66 631 aa10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 XPOTO43592 962 aaKnown RBP10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 KIAA1841Q6NSI8 718 aa10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 IPO4Q8TEX9 1081 aaKnown RBP10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 CCDC94Q9BW85 323 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 TMEM60Q9H2L4 133 aa10.79□□□□□ -0.68
KCNMA1-228ENST00000638223 SHPRHQ149N8 1683 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 DENND3A2RUS2 1198 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 GNAT1P11488 350 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 MXI1P50539 228 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 ARPP19P56211 112 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 EPHA7Q15375 998 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 SLC51AQ86UW1 340 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 RAD54LQ92698 747 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 ZMYND12Q9H0C1 365 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 PPP1R9AQ9ULJ8 1098 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 ARHGAP6O43182 974 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 DAPK3O43293 454 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 MYL1P05976 194 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 TNNC1P63316 161 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 EVX2Q03828 476 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 GOLGA8FQ08AF8 430 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 GOLGA8DPQ0D2H9 430 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 SLC17A8Q8NDX2 589 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 TCP11Q8WWU5 503 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 MAK16Q9BXY0 300 aaKnown RBP10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 MKRN1Q9UHC7 482 aaKnown RBP10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 TRIM49BA6NDI0 452 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 NFIBO00712 420 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 CLDN3O15551 220 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 ATP1A3P13637 1013 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 CD58P19256 250 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 ANKRD36BP1Q96IX9 119 aa10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
KCNMA1-228ENST00000638223 CTSHP09668 335 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 U2AF2P26368 475 aaKnown RBP eCLIP10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 TKFCQ3LXA3 575 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 GNASQ5JWF2 1037 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 C15orf52Q6ZUT6 534 aaKnown RBP10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 PDCL2Q8N4E4 241 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 CHST13Q8NET6 341 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 CCDC114Q96M63 670 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 KCNH4Q9UQ05 1017 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 PPP2R3BQ9Y5P8 575 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 PEAK1Q9H792 1746 aa10.77□□□□□ -0.68
KCNMA1-228ENST00000638223 ICAM1P05362 532 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 CYP2C8P10632 490 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 SCARA5Q6ZMJ2 495 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 NEK9Q8TD19 979 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 SCFD2Q8WU76 684 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 HPS3Q969F9 1004 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 MTRQ99707 1265 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 RPF1Q9H9Y2 349 aaKnown RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 AFPP02771 609 aaKnown RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 MAN2A1Q16706 1144 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 USP50Q70EL3 339 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 POLR3FQ9H1D9 316 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 GINM1Q9NU53 330 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 PCDHB4Q9Y5E5 795 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 GAKO14976 1311 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 ZNF233A6NK53 670 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 ZBBXA8MT70 800 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 SNX16P57768 344 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 HERVK_113P62684 666 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 COASYQ13057 564 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 ZNF568Q3ZCX4 644 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 FMR1NBQ8N0W7 255 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 MAP3K14Q99558 947 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 PRDM5Q9NQX1 630 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 PAXBP1Q9Y5B6 917 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 LTN1O94822 1766 aa10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 COL14A1Q05707 1796 aaKnown RBP10.77□□□□□ -0.69
KCNMA1-228ENST00000638223 SYNJ2BP-COX16A0A087WUM0 186 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 CAPN9O14815 690 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 CASP14P31944 242 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 PHKA2P46019 1235 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 MMP14P50281 582 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 PSMD2Q13200 908 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 VGLL4Q14135 290 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 SEL1L2Q5TEA6 688 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 SCYL2Q6P3W7 929 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 MAATS1Q7Z4T9 603 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 DYDC1Q8WWB3 177 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 SECISBP2LQ93073 1101 aaKnown RBP10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
KCNMA1-228ENST00000638223 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms