RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
SSBP1-215ENST00000612337 CYP2W1Q8TAV3 490 aa20.32■□□□□ 0.84
SSBP1-215ENST00000612337 DNAJB3Q8WWF6 145 aa20.32■□□□□ 0.84
SSBP1-215ENST00000612337 MRPL38Q96DV4 380 aaKnown RBP20.32■□□□□ 0.84
SSBP1-215ENST00000612337 PCYT2Q99447 389 aa20.32■□□□□ 0.84
SSBP1-215ENST00000612337 UBE2ZQ9H832 354 aaPredicted RBP20.32■□□□□ 0.84
SSBP1-215ENST00000612337 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
SSBP1-215ENST00000612337 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.31■□□□□ 0.84
SSBP1-215ENST00000612337 RRN3P2A6NIE6 340 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 H3BNC9 293 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 RPLP2P05387 115 aaKnown RBP20.31■□□□□ 0.84
SSBP1-215ENST00000612337 COL9A1P20849 921 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 ADCY7P51828 1080 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 KRT32Q14532 448 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 PTPROQ16827 1216 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 ADCK5Q3MIX3 580 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 TMEM192Q8IY95 271 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 SDF4Q9BRK5 362 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 ANO3Q9BYT9 981 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 AZI2Q9H6S1 392 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 BARHL2Q9NY43 387 aa20.31■□□□□ 0.84
SSBP1-215ENST00000612337 NLRC5Q86WI3 1866 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 GOLGA8AA7E2F4 631 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 GOLGA8BA8MQT2 603 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 STXBP3O00186 592 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 INSRRP14616 1297 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 RCAN1P53805 252 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 IGBP1P78318 339 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 AP3B2Q13367 1082 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 GPM6BQ13491 265 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 CEP55Q53EZ4 464 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 FBXO47Q5MNV8 452 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 TNPO1Q92973 898 aaKnown RBP20.3■□□□□ 0.84
SSBP1-215ENST00000612337 IL17RAQ96F46 866 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 PGBD1Q96JS3 809 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 GLT8D2Q9H1C3 349 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 CDY2AQ9Y6F7 541 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 RALGAPA2Q2PPJ7 1873 aa20.3■□□□□ 0.84
SSBP1-215ENST00000612337 KLF18A0A0U1RQI7 1052 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 SMCO2A6NFE2 343 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 CDC45O75419 566 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 HMGB1P09429 215 aaKnown RBP20.29■□□□□ 0.84
SSBP1-215ENST00000612337 ARP10275 920 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 ACTR2P61160 394 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 MRPS6P82932 125 aaKnown RBP20.29■□□□□ 0.84
SSBP1-215ENST00000612337 TIGD5Q53EQ6 642 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 TSHZ1Q6ZSZ6 1077 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 PLPPR4Q7Z2D5 763 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 C1QTNF1Q9BXJ1 281 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 AGO4Q9HCK5 861 aaKnown RBP20.29■□□□□ 0.84
SSBP1-215ENST00000612337 FAM217BQ9NTX9 383 aaPredicted RBP20.29■□□□□ 0.84
SSBP1-215ENST00000612337 TRPC6Q9Y210 931 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 TTC3P53804 2025 aa20.29■□□□□ 0.84
SSBP1-215ENST00000612337 MEIS1O00470 390 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 ENPP3O14638 875 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 CDC27P30260 824 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 SREBF1P36956 1147 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 CLK2P49760 499 aaKnown RBP20.28■□□□□ 0.84
SSBP1-215ENST00000612337 ITGB3BPQ13352 177 aaPredicted RBP20.28■□□□□ 0.84
SSBP1-215ENST00000612337 PLCB4Q15147 1175 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 LEXMQ3ZCV2 418 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 IER5Q5VY09 327 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 FIBCD1Q8N539 461 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 SQORQ9Y6N5 450 aa20.28■□□□□ 0.84
SSBP1-215ENST00000612337 ATG7O95352 703 aa20.27■□□□□ 0.84
SSBP1-215ENST00000612337 STAT5BP51692 787 aa20.27■□□□□ 0.84
SSBP1-215ENST00000612337 NIPA1Q7RTP0 329 aa20.27■□□□□ 0.84
SSBP1-215ENST00000612337 ZBTB10Q96DT7 871 aa20.27■□□□□ 0.84
SSBP1-215ENST00000612337 FAM49AQ9H0Q0 323 aaPredicted RBP20.27■□□□□ 0.84
SSBP1-215ENST00000612337 RC3H2Q9HBD1 1191 aaKnown RBP20.27■□□□□ 0.84
SSBP1-215ENST00000612337 TMEM260Q9NX78 707 aa20.27■□□□□ 0.84
SSBP1-215ENST00000612337 PCDHA2Q9Y5H9 948 aa20.27■□□□□ 0.84
SSBP1-215ENST00000612337 MYO7AQ13402 2215 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 C5orf67F2Z3F1 127 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 RB1P06400 928 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 KCNA5P22460 613 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 ZNF76P36508 570 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 BANK1Q8NDB2 785 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 AGO3Q9H9G7 860 aaKnown RBP20.26■□□□□ 0.83
SSBP1-215ENST00000612337 RWDD3Q9Y3V2 267 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 TRPV2Q9Y5S1 764 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 ADGRA3Q8IWK6 1321 aa20.26■□□□□ 0.83
SSBP1-215ENST00000612337 CCDC196A0A1B0GTZ2 297 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 POTEB3A0JP26 581 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 LINC00271P0C7V0 271 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 CD52P31358 61 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 CTNNB1P35222 781 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
SSBP1-215ENST00000612337 SLC26A2P50443 739 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
SSBP1-215ENST00000612337 POTEBQ6S5H4 581 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.25■□□□□ 0.83
SSBP1-215ENST00000612337 TRAPPC12Q8WVT3 735 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 KCNB2Q92953 911 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 CLP1Q92989 425 aaKnown RBP20.25■□□□□ 0.83
SSBP1-215ENST00000612337 ZNF689Q96CS4 500 aaPredicted RBP20.25■□□□□ 0.83
SSBP1-215ENST00000612337 FTHL17Q9BXU8 183 aa20.25■□□□□ 0.83
SSBP1-215ENST00000612337 NSUN3Q9H649 340 aaKnown RBP20.25■□□□□ 0.83
SSBP1-215ENST00000612337 IGKV6D-21A0A0A0MT36 114 aa20.24■□□□□ 0.83
SSBP1-215ENST00000612337 SMIM35A0A1B0GVV1 85 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms