RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ZNF577Q9BSK1 485 aa25.36■■□□□ 1.65
GTF2F1-204ENST00000594965 PHF20Q9BVI0 1012 aa25.36■■□□□ 1.65
GTF2F1-204ENST00000594965 GJB4Q9NTQ9 266 aa25.36■■□□□ 1.65
GTF2F1-204ENST00000594965 STXBP5LQ9Y2K9 1186 aa25.36■■□□□ 1.65
GTF2F1-204ENST00000594965 FDPSP14324 419 aaKnown RBP25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 RABGGTBP53611 331 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 PPFIA1Q13136 1202 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 PLCB4Q15147 1175 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 GRIK4Q16099 956 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 MARCH8Q5T0T0 291 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 GALNT17Q6IS24 598 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 PLPPR4Q7Z2D5 763 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 CDX2Q99626 313 aaPredicted RBP25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 KIF2CQ99661 725 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 OSBPL7Q9BZF2 842 aa25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 YBX2Q9Y2T7 364 aaKnown RBP25.35■■□□□ 1.65
GTF2F1-204ENST00000594965 RSPH10B2B2RC85 870 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 BAIAP3O94812 1187 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 RSPH10BP0C881 870 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 ATP2A2P16615 1042 aaKnown RBP25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 STAT5BP51692 787 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 ST3GAL1Q11201 340 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 CNKSR3Q6P9H4 555 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 RUFY4Q6ZNE9 571 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 ZNF576Q9H609 170 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 AZI2Q9H6S1 392 aa25.34■■□□□ 1.65
GTF2F1-204ENST00000594965 MBLAC1A4D2B0 266 aaPredicted RBP25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 CAND2O75155 1236 aa25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 INSRRP14616 1297 aa25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 RAB30Q15771 203 aa25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 C22orf23Q9BZE7 217 aa25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 TBC1D22BQ9NU19 505 aa25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 ORC3Q9UBD5 711 aaPredicted RBP25.33■■□□□ 1.65
GTF2F1-204ENST00000594965 EVPLQ92817 2033 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 MSH4O15457 936 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 CTSHP09668 335 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 MYOGP15173 224 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 GRIN2CQ14957 1233 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 CCDC60Q8IWA6 550 aaPredicted RBP25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 NSUN7Q8NE18 718 aaKnown RBP25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 ZBTB10Q96DT7 871 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 SLC9A7Q96T83 725 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 NKX2-4Q9H2Z4 354 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 MSRAQ9UJ68 235 aa25.32■■□□□ 1.64
GTF2F1-204ENST00000594965 CYP3A7-CYP3A51PA0A087WV96 503 aa25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 CYP3A7P24462 503 aa25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 WDR5P61964 334 aaKnown RBP25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 FAM26DQ5JW98 314 aa25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 ZNF746Q6NUN9 644 aaPredicted RBP25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 RPAINQ86UA6 219 aa25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 PHOSPHO2Q8TCD6 241 aa25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 TUBE1Q9UJT0 475 aa25.31■■□□□ 1.64
GTF2F1-204ENST00000594965 TDP2O95551 362 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 ATP4AP20648 1035 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 IGBP1P78318 339 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 Q4G0T1 1027 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 TAF2Q6P1X5 1199 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 OXER1Q8TDS5 423 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 TRAPPC12Q8WVT3 735 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 MYLIPQ8WY64 445 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 SLC5A5Q92911 643 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 GJA10Q969M2 543 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 MBOAT7Q96N66 472 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 TRPC6Q9Y210 931 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 PCDHA11Q9Y5I1 949 aa25.3■■□□□ 1.64
GTF2F1-204ENST00000594965 POTEB3A0JP26 581 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 RRN3P2A6NIE6 340 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 JAK2O60674 1132 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 CHRNA1P02708 482 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 SLC26A2P50443 739 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 DEFB103AP81534 67 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 MKRN4PQ13434 485 aaPredicted RBP25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 NONOQ15233 471 aaKnown RBP eCLIP25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 INF2Q27J81 1249 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 PLEKHG4Q58EX7 1191 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 SWSAP1Q6NVH7 229 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 MIS18BP1Q6P0N0 1132 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 POTEBQ6S5H4 581 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 KRT25Q7Z3Z0 450 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 DBF4BQ8NFT6 615 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 ZNF302Q9NR11 478 aa25.29■■□□□ 1.64
GTF2F1-204ENST00000594965 CDH23Q9H251 3354 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 ABHD14A-ACY1A0A1B0GW23 586 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 BACH1O14867 736 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 XBP1P17861 261 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 KRT76Q01546 638 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 MGAT3Q09327 533 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 FAM160B1Q5W0V3 765 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 HERC6Q8IVU3 1022 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 SMAP1Q8IYB5 467 aaPredicted RBP25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 DNAJB3Q8WWF6 145 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 PCDHA10Q9Y5I2 948 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 MYO9BQ13459 2157 aa25.28■■□□□ 1.64
GTF2F1-204ENST00000594965 COL6A3P12111 3177 aa25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 IKBKEQ14164 716 aa25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 EARS2Q5JPH6 523 aaKnown RBP25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 MOXD1Q6UVY6 613 aa25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 TMCO2Q7Z6W1 182 aaPredicted RBP25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 ATP8B4Q8TF62 1192 aa25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 WASF1Q92558 559 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms