RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PPP2R5CQ13362 524 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 SWSAP1Q6NVH7 229 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 POTEDQ86YR6 584 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 CCDC155Q8N6L0 562 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 HAS1Q92839 578 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 UNC45AQ9H3U1 944 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 HIPK3Q9H422 1215 aa29.06■■■□□ 2.24
TRIM28-204ENST00000594806 PDIA4P13667 645 aaKnown RBP29.05■■■□□ 2.24
TRIM28-204ENST00000594806 BFSP2Q13515 415 aa29.05■■■□□ 2.24
TRIM28-204ENST00000594806 CALCRLQ16602 461 aa29.05■■■□□ 2.24
TRIM28-204ENST00000594806 TTC38Q5R3I4 469 aa29.05■■■□□ 2.24
TRIM28-204ENST00000594806 MIER3Q7Z3K6 550 aa29.05■■■□□ 2.24
TRIM28-204ENST00000594806 CCDC60Q8IWA6 550 aaPredicted RBP29.05■■■□□ 2.24
TRIM28-204ENST00000594806 CAGE1Q8TC20 777 aa29.05■■■□□ 2.24
TRIM28-204ENST00000594806 GDF15Q99988 308 aa29.05■■■□□ 2.24
TRIM28-204ENST00000594806 MAFBQ9Y5Q3 323 aaPredicted RBP29.05■■■□□ 2.24
TRIM28-204ENST00000594806 RRN3P2A6NIE6 340 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 BMP8BP34820 402 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 MAGEA10P43363 369 aaPredicted RBP29.04■■■□□ 2.24
TRIM28-204ENST00000594806 PTK7Q13308 1070 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 RILPL1Q5EBL4 403 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 PDXDC2PQ6P474 469 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 PPP1R13LQ8WUF5 828 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 GJA10Q969M2 543 aa29.04■■■□□ 2.24
TRIM28-204ENST00000594806 NOC4LQ9BVI4 516 aaKnown RBP29.04■■■□□ 2.24
TRIM28-204ENST00000594806 PITPNM1O00562 1244 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 HSP90AA1P07900 732 aaKnown RBP29.03■■■□□ 2.24
TRIM28-204ENST00000594806 ATP2B1P20020 1258 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 MARK3P27448 753 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 MCM7P33993 719 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 PPFIA1Q13136 1202 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 MFSD5Q6N075 450 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 ATP6V0A1Q93050 837 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 MTMR9Q96QG7 549 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 VAV3Q9UKW4 847 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 PCDHA12Q9UN75 941 aa29.03■■■□□ 2.24
TRIM28-204ENST00000594806 POTEB3A0JP26 581 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 CHMP2AO43633 222 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 HBP1O60381 514 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 CYP2C9P11712 490 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 ITGB8P26012 769 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 ADAM17P78536 824 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 RBL2Q08999 1139 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 PLCB4Q15147 1175 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 POTEBQ6S5H4 581 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 TMEM199Q8N511 208 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 ATP8B4Q8TF62 1192 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 BADQ92934 168 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 FAM167AQ96KS9 214 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 CTAGE1Q96RT6 745 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 SETD4Q9NVD3 440 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 GABBR1Q9UBS5 961 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 TRPC6Q9Y210 931 aa29.02■■■□□ 2.24
TRIM28-204ENST00000594806 IGSF9BQ9UPX0 1349 aa29.01■■■□□ 2.23
TRIM28-204ENST00000594806 WNT7AO00755 349 aa29.01■■■□□ 2.23
TRIM28-204ENST00000594806 MDM2Q00987 491 aaPredicted RBP29.01■■■□□ 2.23
TRIM28-204ENST00000594806 BRAPQ7Z569 592 aa29.01■■■□□ 2.23
TRIM28-204ENST00000594806 SERINC5Q86VE9 423 aa29.01■■■□□ 2.23
TRIM28-204ENST00000594806 RETREG2Q8NC44 543 aa29.01■■■□□ 2.23
TRIM28-204ENST00000594806 BBXQ8WY36 941 aaPredicted RBP29.01■■■□□ 2.23
TRIM28-204ENST00000594806 PPP1R12CQ9BZL4 782 aa29.01■■■□□ 2.23
TRIM28-204ENST00000594806 RPLP2P05387 115 aaKnown RBP29■■■□□ 2.23
TRIM28-204ENST00000594806 ZNF174Q15697 407 aa29■■■□□ 2.23
TRIM28-204ENST00000594806 GRIK4Q16099 956 aa29■■■□□ 2.23
TRIM28-204ENST00000594806 LMBR1Q8WVP7 490 aa29■■■□□ 2.23
TRIM28-204ENST00000594806 COL1A2P08123 1366 aa29■■■□□ 2.23
TRIM28-204ENST00000594806 DKC1O60832 514 aaKnown RBP eCLIP28.99■■■□□ 2.23
TRIM28-204ENST00000594806 INSRRP14616 1297 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 SYT1P21579 422 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 TOB1P50616 345 aaPredicted RBP28.99■■■□□ 2.23
TRIM28-204ENST00000594806 FPGSQ05932 587 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 HIC1Q14526 733 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 ZNF484Q5JVG2 852 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 CKAP2LQ8IYA6 745 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 PRO3102Q9H379 93 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 TTC12Q9H892 705 aaPredicted RBP28.99■■■□□ 2.23
TRIM28-204ENST00000594806 NRBP2Q9NSY0 501 aa28.99■■■□□ 2.23
TRIM28-204ENST00000594806 MBLAC1A4D2B0 266 aaPredicted RBP28.98■■■□□ 2.23
TRIM28-204ENST00000594806 VPS37CA5D8V6 355 aaPredicted RBP28.98■■■□□ 2.23
TRIM28-204ENST00000594806 LAD1O00515 517 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 CAND2O75155 1236 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 PARNO95453 639 aaKnown RBP28.98■■■□□ 2.23
TRIM28-204ENST00000594806 CYP2C18P33260 490 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 ZNF200P98182 395 aaPredicted RBP28.98■■■□□ 2.23
TRIM28-204ENST00000594806 SPIRE1Q08AE8 756 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 PPIGQ13427 754 aaKnown RBP eCLIP28.98■■■□□ 2.231e-32■□□□□ 10.1
TRIM28-204ENST00000594806 EPHA7Q15375 998 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 TAF2Q6P1X5 1199 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 CHRDL2Q6WN34 429 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 CEP131Q9UPN4 1083 aa28.98■■■□□ 2.23
TRIM28-204ENST00000594806 A0A1W2PPC1 479 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 TREHO43280 583 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 OR52Z1P0C646 297 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 ATP4AP20648 1035 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 TXKP42681 527 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 UBE2OQ9C0C9 1292 aaKnown RBP28.97■■■□□ 2.23
TRIM28-204ENST00000594806 TMEM60Q9H2L4 133 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 FOXD4L1Q9NU39 408 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 TUBE1Q9UJT0 475 aa28.97■■■□□ 2.23
TRIM28-204ENST00000594806 EML1O00423 815 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms