RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PPFIA1Q13136 1202 aa20.99■□□□□ 0.95
SHKBP1-202ENST00000593764 TCTN1Q2MV58 587 aa20.99■□□□□ 0.95
SHKBP1-202ENST00000593764 MARCH8Q5T0T0 291 aa20.99■□□□□ 0.95
SHKBP1-202ENST00000593764 C22orf23Q9BZE7 217 aa20.99■□□□□ 0.95
SHKBP1-202ENST00000593764 AZI2Q9H6S1 392 aa20.99■□□□□ 0.95
SHKBP1-202ENST00000593764 TBC1D22BQ9NU19 505 aa20.99■□□□□ 0.95
SHKBP1-202ENST00000593764 MBLAC1A4D2B0 266 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 ZBBXA8MT70 800 aa20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 ACTN1P12814 892 aa20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 STAT5BP51692 787 aa20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 PLCB4Q15147 1175 aa20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 GRIK4Q16099 956 aa20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 NSUN7Q8NE18 718 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-202ENST00000593764 TMEM265A0A087WTH1 108 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 CYP3A7-CYP3A51PA0A087WV96 503 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 RSPH10B2B2RC85 870 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 MSH4O15457 936 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 CAND2O75155 1236 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 RSPH10BP0C881 870 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 INSRRP14616 1297 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 CYP3A7P24462 503 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 RUFY4Q6ZNE9 571 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 CCDC60Q8IWA6 550 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 TIFAQ96CG3 184 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 OSBPL7Q9BZF2 842 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 CHD7Q9P2D1 2997 aa20.97■□□□□ 0.95
SHKBP1-202ENST00000593764 ATP2A2P16615 1042 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 XBP1P17861 261 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 RBM25P49756 843 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 RABGGTBP53611 331 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 Q4G0T1 1027 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 ZNF746Q6NUN9 644 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 CNKSR3Q6P9H4 555 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 RPAINQ86UA6 219 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 OXER1Q8TDS5 423 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 ZBTB10Q96DT7 871 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 MBOAT7Q96N66 472 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 LIMCH1Q9UPQ0 1083 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 EYSQ5T1H1 3165 aa20.96■□□□□ 0.95
SHKBP1-202ENST00000593764 RRN3P2A6NIE6 340 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 JAK2O60674 1132 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 BAIAP3O94812 1187 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 TDP2O95551 362 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 ATP4AP20648 1035 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 SLC26A2P50443 739 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 NONOQ15233 471 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 INF2Q27J81 1249 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 FAM26DQ5JW98 314 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 SWSAP1Q6NVH7 229 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 KRT25Q7Z3Z0 450 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 WASF1Q92558 559 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 SLC5A5Q92911 643 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 GJA10Q969M2 543 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 CDX2Q99626 313 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 TUBE1Q9UJT0 475 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 STXBP5LQ9Y2K9 1186 aa20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 YBX2Q9Y2T7 364 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-202ENST00000593764 POTEB3A0JP26 581 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 BACH1O14867 736 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 CTSHP09668 335 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 IGBP1P78318 339 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 KRT76Q01546 638 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 RAB30Q15771 203 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 MIS18BP1Q6P0N0 1132 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 TAF2Q6P1X5 1199 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 POTEBQ6S5H4 581 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 MOXD1Q6UVY6 613 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 PHOSPHO2Q8TCD6 241 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 TRAPPC12Q8WVT3 735 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 RIT2Q99578 217 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 ZNF576Q9H609 170 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 ZNF302Q9NR11 478 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 TRPC6Q9Y210 931 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 MAFBQ9Y5Q3 323 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 MYO9BQ13459 2157 aa20.94■□□□□ 0.94
SHKBP1-202ENST00000593764 CHRNA1P02708 482 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 MYOGP15173 224 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 WDR5P61964 334 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 GRIN2CQ14957 1233 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 PLEKHG4Q58EX7 1191 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 EARS2Q5JPH6 523 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 FAM160B1Q5W0V3 765 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 PDXDC2PQ6P474 469 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 SMAP1Q8IYB5 467 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 DBF4BQ8NFT6 615 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 SLC9A7Q96T83 725 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 MSRAQ9UJ68 235 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 PCDHA11Q9Y5I1 949 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 PCDHA10Q9Y5I2 948 aa20.93■□□□□ 0.94
SHKBP1-202ENST00000593764 ABHD14A-ACY1A0A1B0GW23 586 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 PSMD10O75832 226 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 MGAT3Q09327 533 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 MKRN4PQ13434 485 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 ETNPPLQ8TBG4 499 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 ATP8B4Q8TF62 1192 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 DNAJB3Q8WWF6 145 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 TNPO1Q92973 898 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 TNFRSF25Q93038 417 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 NKX2-4Q9H2Z4 354 aa20.92■□□□□ 0.94
SHKBP1-202ENST00000593764 GBF1Q92538 1859 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms