RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 MYO15AQ9UKN7 3530 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 GRM6O15303 877 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 TREHO43280 583 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 DGKIO75912 1065 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 UPP2O95045 317 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 HOXB3P14651 431 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 ZNF200P98182 395 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 DLX2Q07687 328 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 BTG3Q14201 252 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 HIC1Q14526 733 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 PGM5Q15124 567 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 TSHZ3Q63HK5 1081 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 CHMP4CQ96CF2 233 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 INPP4AQ96PE3 977 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 INCENPQ9NQS7 918 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 BAZ2BQ9UIF8 2168 aaKnown RBP10.09□□□□□ -0.79
SMAD4-215ENST00000592911 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-215ENST00000592911 ZBTB5O15062 677 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 FIBPO43427 364 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 CFBP00751 764 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 VPS53Q5VIR6 699 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 MCTP2Q6DN12 878 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 TMEM184AQ6ZMB5 413 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 TSHZ1Q6ZSZ6 1077 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 NPAS4Q8IUM7 802 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 UBALD2Q8IYN6 164 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 CRIPAKQ8N1N5 446 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 RASGRP4Q8TDF6 673 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 SUSD6Q92537 303 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 TBC1D5Q92609 795 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 ASIC4Q96FT7 647 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 CDHR1Q96JP9 859 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 CNNM2Q9H8M5 875 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 JMJD4Q9H9V9 463 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 ALG13Q9NP73 1137 aaKnown RBP10.08□□□□□ -0.8
SMAD4-215ENST00000592911 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
SMAD4-215ENST00000592911 CACNA1BQ00975 2339 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 DOCK5Q9H7D0 1870 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 PLXNA4Q9HCM2 1894 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 MBLAC1A4D2B0 266 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-215ENST00000592911 GCOM1H8Y6P7 765 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-215ENST00000592911 ENPP3O14638 875 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 OPLAHO14841 1288 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 POLR2MP0CAP2 368 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 AVPR2P30518 371 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
SMAD4-215ENST00000592911 MGAT3Q09327 533 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 CAMK1Q14012 370 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 PTPN21Q16825 1174 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 SPPL3Q8TCT6 385 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 LMBR1Q8WVP7 490 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 ZSCAN10Q96SZ4 725 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-215ENST00000592911 GPR20Q99678 358 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 CLEC1BQ9P126 229 aa10.07□□□□□ -0.8
SMAD4-215ENST00000592911 SPATA31C2B4DYI2 1134 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 ZNF213O14771 459 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 CHRNA1P02708 482 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 CTSHP09668 335 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 GOLGA8HP0CJ92 632 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 MYCLP12524 364 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-215ENST00000592911 HOXB8P17481 243 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-215ENST00000592911 NBL1P41271 181 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 SP2Q02086 613 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 FBXO47Q5MNV8 452 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 ATOH1Q92858 354 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-215ENST00000592911 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 KRT23Q9C075 422 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 LZTS1Q9Y250 596 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 USP15Q9Y4E8 981 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-215ENST00000592911 PCDHA1Q9Y5I3 950 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 DCHS1Q96JQ0 3298 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-215ENST00000592911 KDM3AQ9Y4C1 1321 aa10.06□□□□□ -0.8
SMAD4-215ENST00000592911 CARNS1A5YM72 827 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 RRN3P2A6NIE6 340 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
SMAD4-215ENST00000592911 ITGB1P05556 798 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 ARHGAP4P98171 946 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 LPIN1Q14693 890 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 IER5Q5VY09 327 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 NME8Q8N427 588 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 ENAHQ8N8S7 591 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-215ENST00000592911 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 RIPOR3Q96MK2 946 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 NECTIN4Q96NY8 510 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 UBAC1Q9BSL1 405 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 SETD4Q9NVD3 440 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 ERAP1Q9NZ08 941 aa10.05□□□□□ -0.8
SMAD4-215ENST00000592911 NR2E1Q9Y466 385 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms