RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 PSMA7O14818 248 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 PSMD2Q13200 908 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 SPATA1Q5VX52 437 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 SEPT14Q6ZU15 432 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 MRFAP1L1Q96HT8 127 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 RUSC1Q9BVN2 902 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 FANCLQ9NW38 375 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 SLC9A2Q9UBY0 812 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 WDR81Q562E7 1941 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ASB14A6NK59 587 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 FAM155AB1AL88 458 aaPredicted RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 STRNO43815 780 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ZNF18P17022 549 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 UBA1P22314 1058 aaKnown RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ADORA2AP29274 412 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 CDC25BP30305 580 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 PSMC5P62195 406 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 GIT2Q14161 759 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 TAF1CQ15572 869 aaPredicted RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 UGCGQ16739 394 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 FAM26FQ5R3K3 315 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 RINT1Q6NUQ1 792 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 GPR142Q7Z601 462 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 C4orf19Q8IY42 314 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 HPS3Q969F9 1004 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 DBR1Q9UK59 544 aaKnown RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ABT1Q9ULW3 272 aaKnown RBP12.69□□□□□ -0.38
SMAD4-205ENST00000588745 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
SMAD4-205ENST00000588745 ARHGEF35A5YM69 484 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 TMEM88BA6NKF7 163 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 DKC1O60832 514 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMAD4-205ENST00000588745 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
SMAD4-205ENST00000588745 PSAPP07602 524 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 MAPK4P31152 587 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 INHBEP58166 350 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 ACTR2P61160 394 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 FANCCQ00597 558 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 SP2Q02086 613 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 RAD51AP2Q09MP3 1159 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 SREBF2Q12772 1141 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 GRB14Q14449 540 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 CDKAL1Q5VV42 579 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 GUF1Q8N442 669 aaKnown RBP12.68□□□□□ -0.38
SMAD4-205ENST00000588745 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 HHIPL1Q96JK4 782 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
SMAD4-205ENST00000588745 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
SMAD4-205ENST00000588745 MCM3APO60318 1980 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 ARID2Q68CP9 1835 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 ZBTB39O15060 712 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 TGFB3P10600 412 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 CCNE1P24864 410 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 YWHABP31946 246 aaKnown RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 SP4Q02446 784 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 NEDD9Q14511 834 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 HERC4Q5GLZ8 1057 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 MIS18BP1Q6P0N0 1132 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 KCNV1Q6PIU1 500 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 ABHD15Q6UXT9 468 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 ARMCX2Q7L311 632 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 CYFIP1Q7L576 1253 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 EEPD1Q7L9B9 569 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 PLEKHH3Q7Z736 793 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 FBXO16Q8IX29 292 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 P2RX5Q93086 422 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
SMAD4-205ENST00000588745 IFNKQ9P0W0 207 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 CPA4Q9UI42 421 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 ODF2LQ9ULJ1 636 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
SMAD4-205ENST00000588745 CBFA2T2O43439 604 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 SORBS3O60504 671 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 COBLO75128 1261 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 TOMM70O94826 608 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 FAM13AO94988 1023 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms