RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 TXNP10599 105 aaKnown RBP11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 UBA1P22314 1058 aaKnown RBP11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 ACTR2P61160 394 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 CUL4BQ13620 913 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 ECM1Q16610 540 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 IQSEC1Q6DN90 963 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 CYFIP1Q7L576 1253 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 GAS2L3Q86XJ1 694 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 GRAMD1CQ8IYS0 662 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 SEPT1Q8WYJ6 367 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 ANP32BQ92688 251 aaKnown RBP11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 USP6NLQ92738 828 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 ZIC5Q96T25 663 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 APBA2Q99767 749 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 ANKEF1Q9NU02 776 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
NEDD4L-224ENST00000588712 SMTNL1A8MU46 457 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 CCNE2O96020 404 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 HOXD10P28358 340 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 TPM4P67936 248 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 ASIC1P78348 528 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 STIM1Q13586 685 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 LAMC2Q13753 1193 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 CELF3Q5SZQ8 465 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 FAM160B1Q5W0V3 765 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 ABHD15Q6UXT9 468 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 UNC13DQ70J99 1090 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 CCDC65Q8IXS2 484 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 DHX37Q8IY37 1157 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 DDX12PQ92771 950 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 STAMQ92783 540 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 ERCC4Q92889 916 aaPredicted RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 CCDC43Q96MW1 224 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 TIPINQ9BVW5 301 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 BLZF1Q9H2G9 400 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 NRBP1Q9UHY1 535 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 LOXHD1Q8IVV2 1947 aa11.78□□□□□ -0.52
NEDD4L-224ENST00000588712 BIN1O00499 593 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 NOP56O00567 594 aaKnown RBP11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 FARP2O94887 1054 aaPredicted RBP11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 GGPS1O95749 300 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 SUPT20HL2P0C7V6 817 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 ERCC5P28715 1186 aaPredicted RBP11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 SLC12A3P55017 1021 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 SP2Q02086 613 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 SP3Q02447 781 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 DHX8Q14562 1220 aaKnown RBP11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 KCNK18Q7Z418 384 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 EXOC1Q9NV70 894 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 SAGE1Q9NXZ1 904 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 GJD2Q9UKL4 321 aa11.77□□□□□ -0.52
NEDD4L-224ENST00000588712 ARHGEF35A5YM69 484 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 MYMKA6NI61 221 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 BECN2A8MW95 431 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 GOLGA6L19H0YKK7 550 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 BACH1O14867 736 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 KIF20AO95235 890 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 GH1P01241 217 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 PSMC4P43686 418 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 VEGFBP49765 207 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 SLC26A2P50443 739 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 ACVR2BQ13705 512 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 FBXO16Q8IX29 292 aaPredicted RBP11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 BANK1Q8NDB2 785 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 RBSNQ9H1K0 784 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 ZNF302Q9NR11 478 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 PPME1Q9Y570 386 aa11.77□□□□□ -0.53
NEDD4L-224ENST00000588712 IGKV6D-21A0A0A0MT36 114 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 CYP11B2P19099 503 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 PSMC6P62333 389 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 LY6KQ17RY6 165 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 DPCR1Q3MIW9 517 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 KMT5BQ4FZB7 885 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 SWSAP1Q6NVH7 229 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 TAPT1Q6NXT6 567 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 EXOC8Q8IYI6 725 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 NPLOC4Q8TAT6 608 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 NRBP2Q9NSY0 501 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 RNF186Q9NXI6 227 aa11.76□□□□□ -0.53
NEDD4L-224ENST00000588712 GABBR1Q9UBS5 961 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms