RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CPLX1O14810 134 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 LILRA1O75019 489 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 MYCLP12524 364 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 ADCY7P51828 1080 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 SP2Q02086 613 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 SSRP1Q08945 709 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 LRRC41Q15345 812 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 CCSAPQ6IQ19 270 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 CCDC62Q6P9F0 684 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 SMARCC2Q8TAQ2 1214 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 MAF1Q9H063 256 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 ZMYND12Q9H0C1 365 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 VTA1Q9NP79 307 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 XPNPEP3Q9NQH7 507 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 MAP3K20Q9NYL2 800 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 FAM184BQ9ULE4 1060 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 KCNJ14Q9UNX9 436 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
NPLOC4-219ENST00000576713 STK36Q9NRP7 1315 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 LAMA3Q16787 3333 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 LOC102724159A0A0B4J2E5 919 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 M0R2N6 131 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 SORBS3O60504 671 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 FARP2O94887 1054 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 DEXIO95424 95 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 CAPN2P17655 700 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 BEX3Q00994 111 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 TNFAIP2Q03169 654 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 TRAF1Q13077 416 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 PWP2Q15269 919 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 KLHDC9Q8NEP7 349 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 CYP2W1Q8TAV3 490 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 CRYGNQ8WXF5 182 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 CUL5Q93034 780 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 IWS1Q96ST2 819 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 UPF3AQ9H1J1 476 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 RTEL1Q9NZ71 1219 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 ALPK3Q96L96 1907 aa10.84□□□□□ -0.67
NPLOC4-219ENST00000576713 ESYT2A0FGR8 921 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 hCG_1984214I3L0E3 225 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 DUSP11O75319 330 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 EIF3JO75822 258 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 RARBP10826 455 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 ITGB5P18084 799 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 GJA9P57773 515 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 STXBP2Q15833 593 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 EARS2Q5JPH6 523 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 SAMD3Q8N6K7 520 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 ZNF713Q8N859 430 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 PPP1R13LQ8WUF5 828 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 HPS1Q92902 700 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 FERMT2Q96AC1 680 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 ORC3Q9UBD5 711 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-219ENST00000576713 DNM1LO00429 736 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 DYNC1LI2O43237 492 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 MSCO60682 206 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 ATP9AO75110 1047 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 TXNP10599 105 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 CCND2P30279 289 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 WDR4P57081 412 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 NKX3-2P78367 333 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 AKAP17AQ02040 695 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 LRRC26Q2I0M4 334 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 DUSP28Q4G0W2 176 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 PCNX4Q63HM2 1172 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 IQSEC1Q6DN90 963 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 TLK2Q86UE8 772 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 TRIM22Q8IYM9 498 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 SCFD2Q8WU76 684 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 INPP4AQ96PE3 977 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 UIMC1Q96RL1 719 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 ALG1Q9BT22 464 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 PHF20Q9BVI0 1012 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 ANO3Q9BYT9 981 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 DDX41Q9UJV9 622 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 KIAA1217Q5T5P2 1943 aa10.82□□□□□ -0.68
NPLOC4-219ENST00000576713 SPDYE3A6NKU9 549 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 ATG7O95352 703 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 C6orf222P0C671 652 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 TIMP2P16035 220 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 UBA1P22314 1058 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 SREBF1P36956 1147 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 CLDN10P78369 228 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 GUCY1B3Q02153 619 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms