RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TRAF6Q9Y4K3 522 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 BCL9O00512 1426 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 RGS12O14924 1447 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 ATRNO75882 1429 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 CREB3O43889 395 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 GAS7O60861 476 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 SNRPA1P09661 255 aaKnown RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 AMPD1P23109 780 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 IL2P60568 153 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 ANKRD34AQ69YU3 496 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 CXorf57Q6NSI4 855 aaKnown RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 RSPO2Q6UXX9 243 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 TSHZ1Q6ZSZ6 1077 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 KIAA1211Q6ZU35 1233 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 CENPQQ7L2Z9 268 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 MAGEB6Q8N7X4 407 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 PANK1Q8TE04 598 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 ACDQ96AP0 544 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 TRIM8Q9BZR9 551 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 HYPKQ9NX55 129 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 TRPC5Q9UL62 973 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 RNF112Q9ULX5 631 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 GPR55Q9Y2T6 319 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-222ENST00000570139 ACTL7BQ9Y614 415 aa8.6□□□□□ -1.03
CNOT1-222ENST00000570139 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 KRBA1A5PL33 1030 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 OIP5O43482 229 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 ABLIM3O94929 683 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
CNOT1-222ENST00000570139 F2P00734 622 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 ZSCAN20P17040 1043 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-222ENST00000570139 CYP7A1P22680 504 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 KRT24Q2M2I5 525 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 LONRF3Q496Y0 759 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 C1orf229Q6ZS94 237 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-222ENST00000570139 C11orf74Q86VG3 221 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 ITPRIPQ8IWB1 547 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
CNOT1-222ENST00000570139 ZDHHC15Q96MV8 337 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 MPHOSPH6Q99547 160 aaKnown RBP8.59□□□□□ -1.03
CNOT1-222ENST00000570139 PRDM14Q9GZV8 571 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 CABP5Q9NP86 173 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 CRTAC1Q9NQ79 661 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 FAM105AQ9NUU6 356 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 PCDHA9Q9Y5H5 950 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 ATP10DQ9P241 1426 aa8.59□□□□□ -1.03
CNOT1-222ENST00000570139 K7ESF4 209 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 ULK1O75385 1050 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 WISP1O95388 367 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 DRD2P14416 443 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 POU4F1Q01851 419 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 ACBD5Q5T8D3 534 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-222ENST00000570139 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 IFNL3Q8IZI9 196 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 FMR1NBQ8N0W7 255 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-222ENST00000570139 TMEM57Q8N5G2 664 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 JPH3Q8WXH2 748 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-222ENST00000570139 COX4I2Q96KJ9 171 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 MRPL18Q9H0U6 180 aaKnown RBP8.58□□□□□ -1.04
CNOT1-222ENST00000570139 DDX21Q9NR30 783 aaKnown RBP eCLIP8.58□□□□□ -1.04
CNOT1-222ENST00000570139 GFOD1Q9NXC2 390 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 HDAC5Q9UQL6 1122 aa8.58□□□□□ -1.04
CNOT1-222ENST00000570139 AFF2P51816 1311 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 CBX4O00257 560 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 FKBP9O95302 570 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 ID4P47928 161 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 LSSP48449 732 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 SCRN1Q12765 414 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 PTPN21Q16825 1174 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 PRSS53Q2L4Q9 553 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 RNFT1Q5M7Z0 435 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 CWF19L1Q69YN2 538 aaKnown RBP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 FKBP9P1Q75LS8 142 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 CDH24Q86UP0 819 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 DGKHQ86XP1 1220 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 ZC3H7AQ8IWR0 971 aaKnown RBP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 PPIL6Q8IXY8 311 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 C2CD4AQ8NCU7 369 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 SMC1BQ8NDV3 1235 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 RHOBTB2Q9BYZ6 727 aa8.57□□□□□ -1.04
CNOT1-222ENST00000570139 RWDD1Q9H446 243 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-222ENST00000570139 TNKSO95271 1327 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 M0R2C6 588 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
CNOT1-222ENST00000570139 GNAI3P08754 354 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 HMGB2P26583 209 aaKnown RBP8.56□□□□□ -1.04
CNOT1-222ENST00000570139 ADCYAP1R1P41586 468 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 GPR85P60893 370 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 DSG1Q02413 1049 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms