RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 JADE2Q9NQC1 790 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 CLDND1Q9NY35 253 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 RWDD3Q9Y3V2 267 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 UBIAD1Q9Y5Z9 338 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 ADGRA3Q8IWK6 1321 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 GRXCR2A6NFK2 248 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 RRN3P2A6NIE6 340 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 PI4K2BG5E9Z4 385 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 MAFGO15525 162 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 GPR37L1O60883 481 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 NAPAP54920 295 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 MRPS6P82932 125 aaKnown RBP14.86□□□□□ -0.03
SF3B3-202ENST00000562722 MGAT3Q09327 533 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 FBXO47Q5MNV8 452 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 TSHZ1Q6ZSZ6 1077 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 FANCBQ8NB91 859 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 NEK9Q8TD19 979 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 SDF4Q9BRK5 362 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 ESYT1Q9BSJ8 1104 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 SLC9A2Q9UBY0 812 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 COL4A6Q14031 1691 aa14.86□□□□□ -0.03
SF3B3-202ENST00000562722 ENPP3O14638 875 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 RPLP2P05387 115 aaKnown RBP14.85□□□□□ -0.03
SF3B3-202ENST00000562722 RB1P06400 928 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 INSRRP14616 1297 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 IBSPP21815 317 aaPredicted RBP14.85□□□□□ -0.03
SF3B3-202ENST00000562722 CD52P31358 61 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 BMPR1AP36894 532 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 TMEM62Q0P6H9 643 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 COL9A3Q14050 684 aaPredicted RBP14.85□□□□□ -0.03
SF3B3-202ENST00000562722 MARCH8Q5T0T0 291 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 IER5Q5VY09 327 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 TNPO1Q92973 898 aaKnown RBP14.85□□□□□ -0.03
SF3B3-202ENST00000562722 UIMC1Q96RL1 719 aa14.85□□□□□ -0.03
SF3B3-202ENST00000562722 MBLAC1A4D2B0 266 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-202ENST00000562722 GRM6O15303 877 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 CSPP1Q1MSJ5 1256 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 WWC2Q6AWC2 1192 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 PGBD1Q96JS3 809 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 MXRA8Q9BRK3 442 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 LMAN2LQ9H0V9 348 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 C11orf16Q9NQ32 467 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 KCNH7Q9NS40 1196 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 RBM28Q9NW13 759 aaKnown RBP14.84□□□□□ -0.03
SF3B3-202ENST00000562722 TRPV2Q9Y5S1 764 aa14.84□□□□□ -0.03
SF3B3-202ENST00000562722 BRWD1Q9NSI6 2320 aa14.83□□□□□ -0.03
SF3B3-202ENST00000562722 C5orf67F2Z3F1 127 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 NCK2O43639 380 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 ALADP13716 330 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 ZNF76P36508 570 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 ADCY7P51828 1080 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 ACTR2P61160 394 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 PAK2Q13177 524 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 CLUL1Q15846 466 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 TRAPPC12Q8WVT3 735 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 PCYT2Q99447 389 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 FTHL17Q9BXU8 183 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 IGFLR1Q9H665 355 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 AGO3Q9H9G7 860 aaKnown RBP14.83□□□□□ -0.04
SF3B3-202ENST00000562722 RIC8AQ9NPQ8 531 aa14.83□□□□□ -0.04
SF3B3-202ENST00000562722 NLRC5Q86WI3 1866 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 DDX39AO00148 427 aaKnown RBP14.82□□□□□ -0.04
SF3B3-202ENST00000562722 BACH1O14867 736 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 DGKIO75912 1065 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 STAT5BP51692 787 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 NECTIN1Q15223 517 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 RTN1Q16799 776 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 PAN2Q504Q3 1202 aaKnown RBP14.82□□□□□ -0.04
SF3B3-202ENST00000562722 PPP1R18Q6NYC8 613 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 SGMS1Q86VZ5 419 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 CYP2W1Q8TAV3 490 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 TCEANC2Q96MN5 208 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 ANO3Q9BYT9 981 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 RC3H2Q9HBD1 1191 aaKnown RBP14.82□□□□□ -0.04
SF3B3-202ENST00000562722 ALG13Q9NP73 1137 aaKnown RBP14.82□□□□□ -0.04
SF3B3-202ENST00000562722 LRFN2Q9ULH4 789 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 NAP1L2Q9ULW6 460 aaPredicted RBP14.82□□□□□ -0.04
SF3B3-202ENST00000562722 GINS2Q9Y248 185 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 MRPL42Q9Y6G3 142 aaKnown RBP14.82□□□□□ -0.04
SF3B3-202ENST00000562722 CNTNAP5Q8WYK1 1306 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 KAT6AQ92794 2004 aa14.82□□□□□ -0.04
SF3B3-202ENST00000562722 RALGAPA2Q2PPJ7 1873 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 POTEB3A0JP26 581 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 SMCO2A6NFE2 343 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PRR33A8MZF0 331 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 ZBTB43O43298 467 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 FOSP01100 380 aaPredicted RBP14.81□□□□□ -0.04
SF3B3-202ENST00000562722 STAG3L1P0CL83 205 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 ARP10275 920 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 HYAL1Q12794 435 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 CEP55Q53EZ4 464 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 POTEBQ6S5H4 581 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PLPPR4Q7Z2D5 763 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 NPAS4Q8IUM7 802 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms