RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 FRMD3A2A2Y4 597 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 FARP2O94887 1054 aaPredicted RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 STBD1O95210 358 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 ATG7O95352 703 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 ARIH2O95376 493 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 HOXC6P09630 235 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 TGFB3P10600 412 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 DEKP35659 375 aaKnown RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 CT47A1Q5JQC4 288 aaPredicted RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 ABHD15Q6UXT9 468 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 UNC13DQ70J99 1090 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 ARMCX2Q7L311 632 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 SMAP1Q8IYB5 467 aaPredicted RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 CAPNS2Q96L46 248 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 MPHOSPH6Q99547 160 aaKnown RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 HSD3B7Q9H2F3 369 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 RMND1Q9NWS8 449 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 DDX41Q9UJV9 622 aaKnown RBP12.61□□□□□ -0.39
SNX1-212ENST00000560861 DNM3Q9UQ16 869 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
SNX1-212ENST00000560861 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 IKBKBO14920 756 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 AP5Z1O43299 807 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 SNAI1O95863 264 aaPredicted RBP12.6□□□□□ -0.39
SNX1-212ENST00000560861 CTGFP29279 349 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 QARSP47897 775 aaKnown RBP12.6□□□□□ -0.39
SNX1-212ENST00000560861 ACTR2P61160 394 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 ASIC1P78348 528 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 DHX8Q14562 1220 aaKnown RBP12.6□□□□□ -0.39
SNX1-212ENST00000560861 COBLL1Q53SF7 1204 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 COL13A1Q5TAT6 717 aaPredicted RBP12.6□□□□□ -0.39
SNX1-212ENST00000560861 TAPT1Q6NXT6 567 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 SEPT14Q6ZU15 432 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 TPH2Q8IWU9 490 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
SNX1-212ENST00000560861 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 BANK1Q8NDB2 785 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 DDX12PQ92771 950 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 MAML3Q96JK9 1138 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 NACC1Q96RE7 527 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 CFHR5Q9BXR6 569 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 SLC9A2Q9UBY0 812 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 DBR1Q9UK59 544 aaKnown RBP12.6□□□□□ -0.39
SNX1-212ENST00000560861 GJD2Q9UKL4 321 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 PCDHA10Q9Y5I2 948 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 IGSF9BQ9UPX0 1349 aa12.6□□□□□ -0.39
SNX1-212ENST00000560861 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 ZBTB39O15060 712 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 ZNF862O60290 1169 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 AOC2O75106 756 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 SUPT20HL2P0C7V6 817 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 ERCC5P28715 1186 aaPredicted RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 PSMC5P62195 406 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 GIT2Q14161 759 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 DEFB115Q30KQ5 88 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 RINT1Q6NUQ1 792 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 C1orf186Q6ZWK4 172 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 REM2Q8IYK8 340 aaPredicted RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 SMYD4Q8IYR2 804 aaPredicted RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 ADSSL1Q8N142 457 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 RUSC1Q9BVN2 902 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 NAT10Q9H0A0 1025 aaKnown RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 BHMT2Q9H2M3 363 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
SNX1-212ENST00000560861 GDAQ9Y2T3 454 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 PCDHA2Q9Y5H9 948 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 MYH11P35749 1972 aa12.59□□□□□ -0.39
SNX1-212ENST00000560861 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 STK4Q13043 487 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 IRF5Q13568 498 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 NEDD9Q14511 834 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 CYFIP1Q7L576 1253 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 DYMQ7RTS9 669 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 CCDC60Q8IWA6 550 aaPredicted RBP12.58□□□□□ -0.4
SNX1-212ENST00000560861 MSL3Q8N5Y2 521 aaKnown RBP12.58□□□□□ -0.4
SNX1-212ENST00000560861 KIAA0895Q8NCT3 520 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 ENOX1Q8TC92 643 aaKnown RBP12.58□□□□□ -0.4
SNX1-212ENST00000560861 PIGOQ8TEQ8 1089 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 PCYT2Q99447 389 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms