RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
RABGGTA-218ENST00000560777 H0YGN5 161 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 BACH1O14867 736 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 TLR3O15455 904 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 SMIM10L2AP0DMW4 78 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 SMIM10L2BP0DMW5 78 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 SYN1P17600 705 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 MARK3P27448 753 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 HOXC8P31273 242 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 SFNP31947 248 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 TXKP42681 527 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 JAK3P52333 1124 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 SPIRE1Q08AE8 756 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 PLCB4Q15147 1175 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 MIER3Q7Z3K6 550 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 RDM1Q8NG50 284 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 ZNF302Q9NR11 478 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 TMEM39AQ9NV64 488 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
RABGGTA-218ENST00000560777 KIAA0355O15063 1070 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 CYP2C9P11712 490 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 ITGB8P26012 769 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 SLC26A2P50443 739 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 ADAM17P78536 824 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 RESTQ13127 1097 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 PTGDRQ13258 359 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 BECN1Q14457 450 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 PTGISQ16647 500 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 PRDM5Q9NQX1 630 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 GABBR1Q9UBS5 961 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 TBX21Q9UL17 535 aa13.46□□□□□ -0.25
RABGGTA-218ENST00000560777 NRCAMQ92823 1304 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 POTEB3A0JP26 581 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 C17orf102A2RUQ5 167 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 ZNF862O60290 1169 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 INSRRP14616 1297 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 UGCGQ16739 394 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 POTEBQ6S5H4 581 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
RABGGTA-218ENST00000560777 TREHO43280 583 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 TIMP1P01033 207 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 TECP42680 631 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 PPFIA1Q13136 1202 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 PKP1Q13835 747 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 EPHA7Q15375 998 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 GRIK4Q16099 956 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 MARCH8Q5T0T0 291 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 NCAPH2Q6IBW4 605 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 FAM173BQ6P4H8 233 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 ATP8B4Q8TF62 1192 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 ATP6V0A1Q93050 837 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 ZSCAN16Q9H4T2 348 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 TRPC6Q9Y210 931 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 NOD1Q9Y239 953 aa13.44□□□□□ -0.26
RABGGTA-218ENST00000560777 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 IGSF9BQ9UPX0 1349 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 RRN3P2A6NIE6 340 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 LAD1O00515 517 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 CEP290O15078 2479 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 HBP1O60381 514 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 STBD1O95210 358 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 P4HBP07237 508 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 GNAT1P11488 350 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 RAG1P15918 1043 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 PTK7Q13308 1070 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 IL17AQ16552 155 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 TRMT1LQ7Z2T5 733 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 SERINC5Q86VE9 423 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 CKAP2LQ8IYA6 745 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 DHX38Q92620 1227 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 TNPO1Q92973 898 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 WNT8BQ93098 351 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 HSD17B14Q9BPX1 270 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 RGL1Q9NZL6 768 aa13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-218ENST00000560777 UMODL1Q5DID0 1318 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 MBLAC1A4D2B0 266 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 POTEMA6NI47 508 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 SLITRK3O94933 977 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 CYP2C18P33260 490 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 PRPHP41219 470 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 QARSP47897 775 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms