RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 LAMC2Q13753 1193 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 LONRF3Q496Y0 759 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 CTU1Q7Z7A3 348 aaKnown RBP18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 TLK2Q86UE8 772 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 SMAP1Q8IYB5 467 aaPredicted RBP18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 DHX58Q96C10 678 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 POLR3CQ9BUI4 534 aaPredicted RBP18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 BLOC1S4Q9NUP1 217 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 DACT1Q9NYF0 836 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 ARID2Q68CP9 1835 aa18.27■□□□□ 0.52
TNFAIP2-205ENST00000559406 MYADML2A6NDP7 307 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 NKRFO15226 690 aaKnown RBP eCLIP18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 ACTN4O43707 911 aaKnown RBP18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 ZNF202O95125 648 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 SWSAP1Q6NVH7 229 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 CCDC73Q6ZRK6 1079 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 TRIM50Q86XT4 487 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 TPH2Q8IWU9 490 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 SEPT1Q8WYJ6 367 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 LXNQ9BS40 222 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 DDX19AQ9NUU7 478 aaKnown RBP18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 GABBR1Q9UBS5 961 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 SERTAD1Q9UHV2 236 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 KIAA1024Q9UPX6 916 aa18.27■□□□□ 0.51
TNFAIP2-205ENST00000559406 ATP4AP20648 1035 aa18.26■□□□□ 0.51
TNFAIP2-205ENST00000559406 RDM1Q8NG50 284 aa18.26■□□□□ 0.51
TNFAIP2-205ENST00000559406 PPTC7Q8NI37 304 aa18.26■□□□□ 0.51
TNFAIP2-205ENST00000559406 ERMNQ8TAM6 284 aa18.26■□□□□ 0.51
TNFAIP2-205ENST00000559406 TUFT1Q9NNX1 390 aa18.26■□□□□ 0.51
TNFAIP2-205ENST00000559406 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 TMEM150BA6NC51 233 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 E9PMD0 336 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 DUSP11O75319 330 aaKnown RBP18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 STBD1O95210 358 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 P4HBP07237 508 aaKnown RBP18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 PSAPP07602 524 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 MMP3P08254 477 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 BEX3Q00994 111 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 HAUS3Q68CZ6 603 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 MIS18BP1Q6P0N0 1132 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 MTRQ99707 1265 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 TCEAL9Q9UHQ7 104 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 SYNRGQ9UMZ2 1314 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 NOP56O00567 594 aaKnown RBP18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 LGR5O75473 907 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 PGK1P00558 417 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 TXLNAP40222 546 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 MTFR1Q15390 333 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 UTP14CQ5TAP6 766 aaKnown RBP18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 RRAGBQ5VZM2 374 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 GRAMD1CQ8IYS0 662 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 PIGOQ8TEQ8 1089 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 CALML4Q96GE6 196 aa18.25■□□□□ 0.51
TNFAIP2-205ENST00000559406 KDM3AQ9Y4C1 1321 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 LOXHD1Q8IVV2 1947 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 A6NJR5 290 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 TRAK2O60296 914 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 MYCP01106 439 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 QARSP47897 775 aaKnown RBP18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 TRMT1LQ7Z2T5 733 aaKnown RBP18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 STAMQ92783 540 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 UNC93B1Q9H1C4 597 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 Q9Y3F1 56 aa18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 MAFBQ9Y5Q3 323 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP2-205ENST00000559406 BACH1O14867 736 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 ADAMTS4O75173 837 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 MBD3O95983 291 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 ZNF286BP0CG31 522 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 STAT6P42226 847 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 PSMC5P62195 406 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 KLHL40Q2TBA0 621 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 SLC9C1Q4G0N8 1177 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 LHX8Q68G74 356 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 KRBA2Q6ZNG9 492 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 RASSF8Q8NHQ8 419 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 NEK9Q8TD19 979 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 SH2D3AQ9BRG2 576 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 ZNF302Q9NR11 478 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 CCDC39Q9UFE4 941 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 DDX20Q9UHI6 824 aaKnown RBP18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 EMSYQ7Z589 1322 aa18.23■□□□□ 0.51
TNFAIP2-205ENST00000559406 LGALS2P05162 132 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 CASP1P29466 404 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 GJA9P57773 515 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 MCM6Q14566 821 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 FBXO46Q6PJ61 603 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 C4orf19Q8IY42 314 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 AFAP1L1Q8TED9 768 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 RAD54LQ92698 747 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 CDK5RAP3Q96JB5 506 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 C16orf70Q9BSU1 422 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 HMX1Q9NP08 348 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 STK24Q9Y6E0 443 aa18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP2-205ENST00000559406 SLC26A4O43511 780 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms