RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CHD9Q3L8U1 2897 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 C17orf102A2RUQ5 167 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 RBAK-RBAKDNI3L0D1 243 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 LGR5O75473 907 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 PFKMP08237 780 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 CKBP12277 381 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 CIITAP33076 1130 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 RFC2P35250 354 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 ADAM17P78536 824 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 ST3GAL1Q11201 340 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 LRRC8DQ7L1W4 858 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 OTOP2Q7RTS6 562 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 RPUSD2Q8IZ73 545 aaKnown RBP25.75■■□□□ 1.71
PABPN1-207ENST00000556821 FAM177A1Q8N128 213 aaPredicted RBP25.75■■□□□ 1.71
PABPN1-207ENST00000556821 LENG9Q96B70 501 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 SETD4Q9NVD3 440 aa25.75■■□□□ 1.71
PABPN1-207ENST00000556821 DHX15O43143 795 aaKnown RBP25.74■■□□□ 1.71
PABPN1-207ENST00000556821 TREHO43280 583 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 CCNE2O96020 404 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 SELPP16109 830 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 ACTR2P61160 394 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 BLIDQ8IZY5 108 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 LMBR1Q8WVP7 490 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 ATP6V0A1Q93050 837 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 UIMC1Q96RL1 719 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 LRFN3Q9BTN0 628 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 GJB4Q9NTQ9 266 aa25.74■■□□□ 1.71
PABPN1-207ENST00000556821 FDPSP14324 419 aaKnown RBP25.73■■□□□ 1.71
PABPN1-207ENST00000556821 IGFBP4P22692 258 aa25.73■■□□□ 1.71
PABPN1-207ENST00000556821 SETQ01105 290 aaPredicted RBP25.73■■□□□ 1.71
PABPN1-207ENST00000556821 RAB30Q15771 203 aa25.73■■□□□ 1.71
PABPN1-207ENST00000556821 PHF20Q9BVI0 1012 aa25.73■■□□□ 1.71
PABPN1-207ENST00000556821 KCNJ14Q9UNX9 436 aa25.73■■□□□ 1.71
PABPN1-207ENST00000556821 BDP1A6H8Y1 2624 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 DDX39AO00148 427 aaKnown RBP25.72■■□□□ 1.71
PABPN1-207ENST00000556821 IPO5O00410 1097 aaKnown RBP25.72■■□□□ 1.71
PABPN1-207ENST00000556821 ATG7O95352 703 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 MARK3P27448 753 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 ZNF618Q5T7W0 954 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 IL27Q8NEV9 243 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 SMARCAD1Q9H4L7 1026 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 EPHX3Q9H6B9 360 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 ERAP1Q9NZ08 941 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 MSRAQ9UJ68 235 aa25.72■■□□□ 1.71
PABPN1-207ENST00000556821 YBX2Q9Y2T7 364 aaKnown RBP25.72■■□□□ 1.71
PABPN1-207ENST00000556821 MBTPS1Q14703 1052 aa25.71■■□□□ 1.71
PABPN1-207ENST00000556821 PRR16Q569H4 304 aa25.71■■□□□ 1.71
PABPN1-207ENST00000556821 GALNT17Q6IS24 598 aa25.71■■□□□ 1.71
PABPN1-207ENST00000556821 NSUN7Q8NE18 718 aaKnown RBP25.71■■□□□ 1.71
PABPN1-207ENST00000556821 TBCKQ8TEA7 893 aa25.71■■□□□ 1.71
PABPN1-207ENST00000556821 GLG1Q92896 1179 aa25.71■■□□□ 1.71
PABPN1-207ENST00000556821 NKX2-4Q9H2Z4 354 aa25.71■■□□□ 1.71
PABPN1-207ENST00000556821 ORC3Q9UBD5 711 aaPredicted RBP25.71■■□□□ 1.71
PABPN1-207ENST00000556821 NRCAMQ92823 1304 aa25.7■■□□□ 1.71
PABPN1-207ENST00000556821 NBNO60934 754 aa25.7■■□□□ 1.7
PABPN1-207ENST00000556821 USP11P51784 963 aa25.7■■□□□ 1.7
PABPN1-207ENST00000556821 ZNF577Q9BSK1 485 aa25.7■■□□□ 1.7
PABPN1-207ENST00000556821 MTIF3Q9H2K0 278 aaKnown RBP25.7■■□□□ 1.7
PABPN1-207ENST00000556821 IGKV6D-21A0A0A0MT36 114 aa25.69■■□□□ 1.7
PABPN1-207ENST00000556821 RBM25P49756 843 aaKnown RBP25.69■■□□□ 1.7
PABPN1-207ENST00000556821 TFF2Q03403 129 aa25.69■■□□□ 1.7
PABPN1-207ENST00000556821 PPFIA1Q13136 1202 aa25.69■■□□□ 1.7
PABPN1-207ENST00000556821 C22orf23Q9BZE7 217 aa25.69■■□□□ 1.7
PABPN1-207ENST00000556821 CXCL10P02778 98 aa25.68■■□□□ 1.7
PABPN1-207ENST00000556821 GNAT1P11488 350 aa25.68■■□□□ 1.7
PABPN1-207ENST00000556821 THPOP40225 353 aa25.68■■□□□ 1.7
PABPN1-207ENST00000556821 TCTN1Q2MV58 587 aa25.68■■□□□ 1.7
PABPN1-207ENST00000556821 ABHD15Q6UXT9 468 aa25.68■■□□□ 1.7
PABPN1-207ENST00000556821 CHD7Q9P2D1 2997 aa25.68■■□□□ 1.7
PABPN1-207ENST00000556821 JAK2O60674 1132 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 PARNO95453 639 aaKnown RBP25.67■■□□□ 1.7
PABPN1-207ENST00000556821 TDP2O95551 362 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 POU3F3P20264 500 aaPredicted RBP25.67■■□□□ 1.7
PABPN1-207ENST00000556821 STAT5BP51692 787 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 PLCB4Q15147 1175 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 GRIK4Q16099 956 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 MARCH8Q5T0T0 291 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 PLPPR4Q7Z2D5 763 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 CCDC60Q8IWA6 550 aaPredicted RBP25.67■■□□□ 1.7
PABPN1-207ENST00000556821 OXER1Q8TDS5 423 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 FTOQ9C0B1 505 aaKnown RBP eCLIP25.67■■□□□ 1.72e-10■■□□□ 12.9
PABPN1-207ENST00000556821 TSPYL2Q9H2G4 693 aaPredicted RBP25.67■■□□□ 1.7
PABPN1-207ENST00000556821 AZI2Q9H6S1 392 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 SLC28A3Q9HAS3 691 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 TBC1D22BQ9NU19 505 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 ARID2Q68CP9 1835 aa25.67■■□□□ 1.7
PABPN1-207ENST00000556821 MBLAC1A4D2B0 266 aaPredicted RBP25.66■■□□□ 1.7
PABPN1-207ENST00000556821 ZBBXA8MT70 800 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 MSH4O15457 936 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 ACTN1P12814 892 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 KCNQ1P51787 676 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 NONOQ15233 471 aaKnown RBP eCLIP25.66■■□□□ 1.7
PABPN1-207ENST00000556821 KRT25Q7Z3Z0 450 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 MBOAT7Q96N66 472 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 LIMCH1Q9UPQ0 1083 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 SLC4A7Q9Y6M7 1214 aa25.66■■□□□ 1.7
PABPN1-207ENST00000556821 INSRRP14616 1297 aa25.65■■□□□ 1.7
PABPN1-207ENST00000556821 XBP1P17861 261 aa25.65■■□□□ 1.7
PABPN1-207ENST00000556821 INF2Q27J81 1249 aa25.65■■□□□ 1.7
PABPN1-207ENST00000556821 AAK1Q2M2I8 961 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms