RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 CKAP2LQ8IYA6 745 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
PNN-203ENST00000554117 FIBCD1Q8N539 461 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 GDPD5Q8WTR4 605 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 TCEANC2Q96MN5 208 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 PRDM6Q9NQX0 595 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 KCNH7Q9NS40 1196 aa12.24□□□□□ -0.45
PNN-203ENST00000554117 LINC01553A4QN01 128 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 STXBP3O00186 592 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 ATP9AO75110 1047 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 SCG2P13521 617 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 ITGB5P18084 799 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 TIGD5Q53EQ6 642 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
PNN-203ENST00000554117 NIPA1Q7RTP0 329 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 PLPPR4Q7Z2D5 763 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 RPAINQ86UA6 219 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 BRF1Q92994 677 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 WNT8BQ93098 351 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 TOP1MTQ969P6 601 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 FAM50BQ9Y247 325 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
PNN-203ENST00000554117 CHD9Q3L8U1 2897 aa12.23□□□□□ -0.45
PNN-203ENST00000554117 COL1A2P08123 1366 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 GSTTP1A0A1W2PQM5 241 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 LCHNA4D1U4 455 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 CPLX1O14810 134 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 EIF5BO60841 1220 aaKnown RBP12.22□□□□□ -0.45
PNN-203ENST00000554117 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 GHRP10912 638 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 SREBF1P36956 1147 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 ACTR2P61160 394 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 MRPS6P82932 125 aaKnown RBP12.22□□□□□ -0.45
PNN-203ENST00000554117 APOBRQ0VD83 1088 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 GPNMBQ14956 572 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
PNN-203ENST00000554117 ADCK5Q3MIX3 580 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 MIS18BP1Q6P0N0 1132 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 TSHZ1Q6ZSZ6 1077 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 TMCO2Q7Z6W1 182 aaPredicted RBP12.22□□□□□ -0.45
PNN-203ENST00000554117 PLA2G4DQ86XP0 818 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 NME8Q8N427 588 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 PPP2R3CQ969Q6 453 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 IL17RAQ96F46 866 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 C22orf23Q9BZE7 217 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 FAM49AQ9H0Q0 323 aaPredicted RBP12.22□□□□□ -0.45
PNN-203ENST00000554117 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 TBC1D22BQ9NU19 505 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 CEP131Q9UPN4 1083 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 SAMM50Q9Y512 469 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 CDY2AQ9Y6F7 541 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 SQORQ9Y6N5 450 aa12.22□□□□□ -0.45
PNN-203ENST00000554117 ESYT2A0FGR8 921 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
PNN-203ENST00000554117 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.45
PNN-203ENST00000554117 HBP1O60381 514 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 INSRRP14616 1297 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 HSPA4P34932 840 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
PNN-203ENST00000554117 PAK2Q13177 524 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 GPM6BQ13491 265 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 HIC1Q14526 733 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 JAKMIP3Q5VZ66 844 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 PGBD1Q96JS3 809 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.45
PNN-203ENST00000554117 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.45
PNN-203ENST00000554117 ZNF302Q9NR11 478 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.45
PNN-203ENST00000554117 REV3LO60673 3130 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 IPO5O00410 1097 aaKnown RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 PRPF3O43395 683 aaKnown RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 RB1P06400 928 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 PSAPP07602 524 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 XBP1P17861 261 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 CTNNB1P35222 781 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 ADD1P35611 737 aaKnown RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 ADAM17P78536 824 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 KRT76Q01546 638 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 BTG3Q14201 252 aaPredicted RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 PUS10Q3MIT2 529 aaKnown RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 TMEM192Q8IY95 271 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 MRPL38Q96DV4 380 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms