RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ZCWPW2Q504Y3 356 aa19.69■□□□□ 0.74
RAB40C-203ENST00000535977 SYN2Q92777 582 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-203ENST00000535977 PITPNM2Q9BZ72 1349 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 FOSP01100 380 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-203ENST00000535977 ATP1A1P05023 1023 aaKnown RBP19.68■□□□□ 0.74
RAB40C-203ENST00000535977 STRIP1Q5VSL9 837 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 HAUS3Q68CZ6 603 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 SLFN13Q68D06 897 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 C2CD5Q86YS7 1000 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 CCDC13Q8IYE1 715 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 ARL8AQ96BM9 186 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 LACRTQ9GZZ8 138 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 SLC40A1Q9NP59 571 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 MYH7BA7E2Y1 1941 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 SSU72P8A0A1W2PR75 194 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 APBA3O96018 575 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 MARSP56192 900 aaKnown RBP19.68■□□□□ 0.74
RAB40C-203ENST00000535977 TTMPQ5BVD1 217 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 SND1Q7KZF4 910 aaKnown RBP eCLIP19.68■□□□□ 0.74
RAB40C-203ENST00000535977 DEFB132Q7Z7B7 95 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 KIRREL3Q8IZU9 778 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 AENQ8WTP8 325 aaKnown RBP19.68■□□□□ 0.74
RAB40C-203ENST00000535977 ANO3Q9BYT9 981 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 IFIH1Q9BYX4 1025 aaKnown RBP19.68■□□□□ 0.74
RAB40C-203ENST00000535977 PCDHA13Q9Y5I0 950 aa19.68■□□□□ 0.74
RAB40C-203ENST00000535977 PLA2G4BP0C869 781 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 EEF2P13639 858 aaKnown RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 CCNHP51946 323 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 NAP1L1P55209 391 aaKnown RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 ECM1Q16610 540 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 TMEM179Q6ZVK1 233 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 MICALCLQ6ZW33 695 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 YTHDF3Q7Z739 585 aaKnown RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 ERMNQ8TAM6 284 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 FAM184BQ9ULE4 1060 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 NFIAQ12857 509 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 TATDN1Q6P1N9 297 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 KCTD17Q8N5Z5 321 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 MXD3Q9BW11 206 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 FAM207AQ9NSI2 230 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 TRAF5O00463 557 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 ZEB2O60315 1214 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 KIF11P52732 1056 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 CDC37Q16543 378 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 GMCL1P1Q8NEA9 526 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 ARHGAP20Q9P2F6 1191 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 KIAA1024Q9UPX6 916 aa19.67■□□□□ 0.74
RAB40C-203ENST00000535977 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-203ENST00000535977 RCCD1A6NED2 376 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 AKR1B10O60218 316 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 ATP1A2P50993 1020 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 SF3B2Q13435 895 aaKnown RBP19.66■□□□□ 0.74
RAB40C-203ENST00000535977 NAA35Q5VZE5 725 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 CACNA2D4Q7Z3S7 1137 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 ALS2CR12Q96Q35 445 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 AMNQ9BXJ7 453 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 LUC7LQ9NQ29 371 aaKnown RBP19.66■□□□□ 0.74
RAB40C-203ENST00000535977 SYNPO2Q9UMS6 1093 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 ITIH3Q06033 890 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 CCDC70Q6NSX1 233 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 RRAGAQ7L523 313 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 SH2D4AQ9H788 454 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 POLD4Q9HCU8 107 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 CEP72Q9P209 647 aa19.66■□□□□ 0.74
RAB40C-203ENST00000535977 PJA2O43164 708 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 OPA1O60313 960 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 EIF4A3P38919 411 aaKnown RBP19.65■□□□□ 0.74
RAB40C-203ENST00000535977 CDR1P51861 262 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 TRAF1Q13077 416 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 EDRF1Q3B7T1 1238 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 Q4G0T1 1027 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 FAM43BQ6ZT52 329 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-203ENST00000535977 BAP1Q92560 729 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 RUBCNQ92622 972 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 PAGR1Q9BTK6 254 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 TANGO6Q9C0B7 1094 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 DNAJC18Q9H819 358 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 PCDHA2Q9Y5H9 948 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 A0A1B0GUA9 196 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L15C9J2P7 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L13C9JLJ4 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L11C9JVI0 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L18D6R9N7 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L22D6RA61 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L17D6RBQ6 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L19D6RCP7 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L20D6RJB6 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 SSBP05455 408 aaKnown RBP eCLIP19.65■□□□□ 0.74
RAB40C-203ENST00000535977 CYP27A1Q02318 531 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L24Q0WX57 530 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 PLCB4Q15147 1175 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 SNCBQ16143 134 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 USP17L6PQ6QN14 398 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 FAM228AQ86W67 206 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 GPBP1Q86WP2 473 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 FAM20AQ96MK3 541 aa19.65■□□□□ 0.74
RAB40C-203ENST00000535977 SERPINA10Q9UK55 444 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms