RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CASC1Q6TDU7 716 aa24.48■■□□□ 1.51
SSH3-211ENST00000534112 CMTR1Q8N1G2 835 aaKnown RBP24.48■■□□□ 1.51
SSH3-211ENST00000534112 MTA3Q9BTC8 594 aa24.48■■□□□ 1.51
SSH3-211ENST00000534112 PKD2L1Q9P0L9 805 aa24.48■■□□□ 1.51
SSH3-211ENST00000534112 UBIAD1Q9Y5Z9 338 aa24.48■■□□□ 1.51
SSH3-211ENST00000534112 CDY2AQ9Y6F7 541 aa24.48■■□□□ 1.51
SSH3-211ENST00000534112 DGKIO75912 1065 aa24.47■■□□□ 1.51
SSH3-211ENST00000534112 DLX2Q07687 328 aaPredicted RBP24.47■■□□□ 1.51
SSH3-211ENST00000534112 MTMR1Q13613 665 aa24.47■■□□□ 1.51
SSH3-211ENST00000534112 TSHZ1Q6ZSZ6 1077 aa24.47■■□□□ 1.51
SSH3-211ENST00000534112 TMTC2Q8N394 836 aa24.47■■□□□ 1.51
SSH3-211ENST00000534112 AGO3Q9H9G7 860 aaKnown RBP24.47■■□□□ 1.51
SSH3-211ENST00000534112 RBM8AQ9Y5S9 174 aaKnown RBP24.47■■□□□ 1.51
SSH3-211ENST00000534112 DOCK5Q9H7D0 1870 aa24.47■■□□□ 1.51
SSH3-211ENST00000534112 PRC1O43663 620 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 IGBP1P78318 339 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 SMAD2Q15796 467 aaKnown RBP24.46■■□□□ 1.51
SSH3-211ENST00000534112 CLUL1Q15846 466 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 UBE2SQ16763 222 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 NFXL1Q6ZNB6 911 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 ZBTB10Q96DT7 871 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 PLVAPQ9BX97 442 aa24.46■■□□□ 1.51
SSH3-211ENST00000534112 RRN3P2A6NIE6 340 aa24.45■■□□□ 1.5
SSH3-211ENST00000534112 MAFGO15525 162 aa24.45■■□□□ 1.5
SSH3-211ENST00000534112 CD52P31358 61 aa24.45■■□□□ 1.5
SSH3-211ENST00000534112 MRPS6P82932 125 aaKnown RBP24.45■■□□□ 1.5
SSH3-211ENST00000534112 LINC01599Q8WXQ3 324 aa24.45■■□□□ 1.5
SSH3-211ENST00000534112 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.5
SSH3-211ENST00000534112 UPF3BQ9BZI7 483 aaKnown RBP24.45■■□□□ 1.5
SSH3-211ENST00000534112 FAM49AQ9H0Q0 323 aaPredicted RBP24.45■■□□□ 1.5
SSH3-211ENST00000534112 JADE2Q9NQC1 790 aa24.45■■□□□ 1.5
SSH3-211ENST00000534112 PLAGL2Q9UPG8 496 aa24.45■■□□□ 1.5
SSH3-211ENST00000534112 hCG_1642624A0A1W2PR95 340 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 CCDC69A6NI79 296 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 SPDYE3A6NKU9 549 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 SH2B2O14492 632 aaPredicted RBP24.44■■□□□ 1.5
SSH3-211ENST00000534112 MMP1P03956 469 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 RPLP2P05387 115 aaKnown RBP24.44■■□□□ 1.5
SSH3-211ENST00000534112 INSRRP14616 1297 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 RXRAP19793 462 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 MCM5P33992 734 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 GTF2F1P35269 517 aaKnown RBP eCLIP24.44■■□□□ 1.5
SSH3-211ENST00000534112 IRS1P35568 1242 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 CAMK1Q14012 370 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 IER5Q5VY09 327 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 RTN4RL1Q86UN2 441 aaPredicted RBP24.44■■□□□ 1.5
SSH3-211ENST00000534112 CRIPAKQ8N1N5 446 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 PCYT2Q99447 389 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 IGFLR1Q9H665 355 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 ALG13Q9NP73 1137 aaKnown RBP24.44■■□□□ 1.5
SSH3-211ENST00000534112 PCDHA6Q9UN73 950 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 PCDHA8Q9Y5H6 950 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 C5orf42Q9H799 3197 aa24.44■■□□□ 1.5
SSH3-211ENST00000534112 MBTPS2O43462 519 aa24.43■■□□□ 1.5
SSH3-211ENST00000534112 CSPG5O95196 566 aa24.43■■□□□ 1.5
SSH3-211ENST00000534112 ALYREFQ86V81 257 aaKnown RBP24.43■■□□□ 1.5
SSH3-211ENST00000534112 TMEM87BQ96K49 555 aa24.43■■□□□ 1.5
SSH3-211ENST00000534112 JPH1Q9HDC5 661 aaPredicted RBP24.43■■□□□ 1.5
SSH3-211ENST00000534112 MRPL42Q9Y6G3 142 aaKnown RBP24.43■■□□□ 1.5
SSH3-211ENST00000534112 SQORQ9Y6N5 450 aa24.43■■□□□ 1.5
SSH3-211ENST00000534112 TTC3P53804 2025 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 KAT6AQ92794 2004 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 TBX10O75333 385 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 CALM1P0DP23 149 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 CALM2P0DP24 149 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 CALM3P0DP25 149 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 COL9A3Q14050 684 aaPredicted RBP24.42■■□□□ 1.5
SSH3-211ENST00000534112 CCDC82Q8N4S0 544 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 P2RX5Q93086 422 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 FTHL17Q9BXU8 183 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 AZI2Q9H6S1 392 aa24.42■■□□□ 1.5
SSH3-211ENST00000534112 RALGAPA2Q2PPJ7 1873 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 NLRC5Q86WI3 1866 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 LINC01565O15544 149 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 LIFRP42702 1097 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 ADAM15Q13444 863 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 SMAD4Q13485 552 aaKnown RBP24.41■■□□□ 1.5
SSH3-211ENST00000534112 RAB11FIP4Q86YS3 637 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 CMTR2Q8IYT2 770 aaKnown RBP24.41■■□□□ 1.5
SSH3-211ENST00000534112 POP1Q99575 1024 aaKnown RBP24.41■■□□□ 1.5
SSH3-211ENST00000534112 KCNH7Q9NS40 1196 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 SLC9A2Q9UBY0 812 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 PADI3Q9ULW8 664 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 TRPC6Q9Y210 931 aa24.41■■□□□ 1.5
SSH3-211ENST00000534112 DNAJB1P25685 340 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 TMEM62Q0P6H9 643 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 NAALADL2Q58DX5 795 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 NPAS4Q8IUM7 802 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 FANCBQ8NB91 859 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 SPPL3Q8TCT6 385 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 TNPO1Q92973 898 aaKnown RBP24.4■■□□□ 1.5
SSH3-211ENST00000534112 CD207Q9UJ71 328 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 PCDHA2Q9Y5H9 948 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 TRPV2Q9Y5S1 764 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 SLC12A7Q9Y666 1083 aa24.4■■□□□ 1.5
SSH3-211ENST00000534112 TRIOO75962 3097 aa24.39■■□□□ 1.5
SSH3-211ENST00000534112 M0QZ92 97 aa24.39■■□□□ 1.49
SSH3-211ENST00000534112 ITGB1P05556 798 aa24.39■■□□□ 1.49
SSH3-211ENST00000534112 PLCB4Q15147 1175 aa24.39■■□□□ 1.49
SSH3-211ENST00000534112 TMTC3Q6ZXV5 915 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms