RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GORABQ5T7V8 394 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 CST9Q5W186 159 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 CDCA2Q69YH5 1023 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 FBXO46Q6PJ61 603 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 PAOXQ6QHF9 649 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 USP53Q70EK8 1073 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 Q7L0L9 218 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 MTDHQ86UE4 582 aaKnown RBP6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 C11orf74Q86VG3 221 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 KSR1Q8IVT5 923 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 TTLL6Q8N841 843 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 TRIM11Q96F44 468 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZDHHC15Q96MV8 337 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 PSMG3-AS1Q96PY0 264 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 MENTQ9BUN1 341 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPR27Q9NS67 375 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GFOD1Q9NXC2 390 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 RNF186Q9NXI6 227 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GOLGA6AQ9NYA3 693 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZKSCAN5Q9Y2L8 839 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 ST14Q9Y5Y6 855 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 MEFVO15553 781 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 TSPAN6O43657 245 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 ULK1O75385 1050 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 PYGMP11217 842 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 BPIP17213 487 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 EN2P19622 333 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 RFC4P35249 363 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 PREPP48147 710 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPR85P60893 370 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 GUCY1A3Q02108 690 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 NMIQ13287 307 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 CLEC16AQ2KHT3 1053 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 FAM47CQ5HY64 1035 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPAT2Q6NUI2 795 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 FGD2Q7Z6J4 655 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZNF655Q8N720 491 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 DAGLBQ8NCG7 672 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 PI4K2BQ8TCG2 481 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 CHMP4CQ96CF2 233 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 C1orf159Q96HA4 380 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 FAM126AQ9BYI3 521 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 ASPSCR1Q9BZE9 553 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPR55Q9Y2T6 319 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 BACE2Q9Y5Z0 518 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 VPS8Q8N3P4 1428 aa6.05□□□□□ -1.44
HMGB1P23-201ENST00000518743 FAM95CA0A1B0GW59 222 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 CRTAMO95727 393 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 NFICP08651 508 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 HOXB4P17483 251 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 SEPHS1P49903 392 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 SCRN1Q12765 414 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 HDAC1Q13547 482 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 PCBP1Q15365 356 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 PIK3R6Q5UE93 754 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 EEF1DP3Q658K8 133 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 LINC00114Q6XXX2 140 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZBTB46Q86UZ6 589 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 ALYREFQ86V81 257 aaKnown RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 WDR75Q8IWA0 830 aaKnown RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZC3H7AQ8IWR0 971 aaKnown RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 PPIL6Q8IXY8 311 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 DTWD2Q8NBA8 298 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 LINC00116Q8NCU8 138 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 MORC4Q8TE76 937 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 DPF3Q92784 378 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 COPS5Q92905 334 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 MTMR8Q96EF0 704 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 SCLYQ96I15 445 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 FAM46AQ96IP4 442 aaKnown RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 TAOK3Q9H2K8 898 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 TRIT1Q9H3H1 467 aaKnown RBP6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 SAMD15Q9P1V8 674 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 MUC6Q6W4X9 2439 aa6.04□□□□□ -1.44
HMGB1P23-201ENST00000518743 RBBP6Q7Z6E9 1792 aaKnown RBP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 NCOR1O75376 2440 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 PIK3C2GO75747 1445 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 IGF2BP3O00425 579 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 AURKAO14965 403 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 TPD52L2O43399 206 aaKnown RBP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 KATNA1O75449 491 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 EIF3JO75822 258 aaKnown RBP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 KRT18P05783 430 aaKnown RBP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 LTBRP36941 435 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 CYP27A1Q02318 531 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 MCL1Q07820 350 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 KCNMA1Q12791 1236 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 PAK1Q13153 545 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZNF460Q14592 562 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 NTRK3Q16288 839 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 KIZQ2M2Z5 673 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 CDPF1Q6NVV7 123 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 STRA8Q7Z7C7 330 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 ARHGEF25Q86VW2 580 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 CHPFQ8IZ52 775 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 AGGF1Q8N302 714 aaeCLIP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 KCNH5Q8NCM2 988 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 UTP4Q969X6 686 aaKnown RBP6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 HHIPL1Q96JK4 782 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms