RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 FAM133AQ8N9E0 248 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 DCAF4Q8WV16 495 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 MKL1Q969V6 931 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 ARL8AQ96BM9 186 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 PBKQ96KB5 322 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 CCDC17Q96LX7 622 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 RUFY1Q96T51 708 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 ANO3Q9BYT9 981 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 INTUQ9ULD6 942 aa7.32□□□□□ -1.24
CDH12-203ENST00000517378 GTPBP10A4D1E9 387 aaKnown RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 ZNF233A6NK53 670 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 PDXKO00764 312 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 MED24O75448 989 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 FTCDO95954 541 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 FAM153BP0C7A2 387 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 GYS1P13807 737 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 UCHL3P15374 230 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 MMP14P50281 582 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 GNGT1P63211 74 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 TNNC1P63316 161 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 GIT2Q14161 759 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 IFI16Q16666 785 aaKnown RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 KNOP1Q1ED39 458 aaKnown RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 FAM153CQ494X1 144 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 HERC4Q5GLZ8 1057 aaPredicted RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 LRIG3Q6UXM1 1119 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 FAM196AQ6ZSG2 479 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 SLFN11Q7Z7L1 901 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 SYT2Q8N9I0 419 aaPredicted RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 SCFD2Q8WU76 684 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 CASKIN2Q8WXE0 1202 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 GJA10Q969M2 543 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 PACSIN1Q9BY11 444 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 EPB41L5Q9HCM4 733 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 FAM153AQ9UHL3 310 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 HDAC9Q9UKV0 1011 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 A0A087WUV0 522 aaPredicted RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 MEIS2O14770 477 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 GFPT2O94808 682 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 KIF4AO95239 1232 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 ERCC3P19447 782 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 NR2F2P24468 414 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 RPA1P27694 616 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 ECHS1P30084 290 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 HOXD13P35453 343 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 NOP2P46087 812 aaKnown RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 EIF6P56537 245 aaKnown RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 GUCY2DQ02846 1103 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 PTK2Q05397 1052 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 PICALMQ13492 652 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 CUL1Q13616 776 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 EPHA7Q15375 998 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 NFIL3Q16649 462 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 QRICH1Q2TAL8 776 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 HHIPL2Q6UWX4 724 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 ZNF571Q7Z3V5 609 aaPredicted RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 TADA2BQ86TJ2 420 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 TEX2Q8IWB9 1127 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 NELFCDQ8IXH7 590 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 CERS5Q8N5B7 392 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 LENG9Q96B70 501 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 CCDC43Q96MW1 224 aaKnown RBP7.31□□□□□ -1.24
CDH12-203ENST00000517378 ISCUQ9H1K1 167 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 SIX2Q9NPC8 291 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 ADAMTS1Q9UHI8 967 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 NFU1Q9UMS0 254 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 LOXHD1Q8IVV2 1947 aa7.31□□□□□ -1.24
CDH12-203ENST00000517378 SHTN1A0MZ66 631 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 POTEFA5A3E0 1075 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 RAD51CO43502 376 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 CALUO43852 315 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 AFPP02771 609 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 SERPINB2P05120 415 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 POTEIP0CG38 1075 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 SPATA31C1P0DKV0 1188 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 PON1P27169 355 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 CIITAP33076 1130 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 SLC16A2P36021 539 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 EPS15P42566 896 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 CASP5P51878 434 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 NAP1L1P55209 391 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 NPEPPSP55786 919 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 GTF2IP78347 998 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 MRPS25P82663 173 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 POTEEQ6S8J3 1075 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 CATSPER3Q86XQ3 398 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 SPATS2Q86XZ4 545 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 RASGEF1CQ8N431 466 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 OLIG1Q8TAK6 271 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 ERMNQ8TAM6 284 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 BCAS4Q8TDM0 211 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 PLEKHA4Q9H4M7 779 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 TAF1DQ9H5J8 278 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 METTL14Q9HCE5 456 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 TYW1Q9NV66 732 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 TBC1D7Q9P0N9 293 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 NYAP2Q9P242 653 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms