RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MAGEB10Q96LZ2 347 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 TACO1Q9BSH4 297 aaKnown RBP5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 MRPL4Q9BYD3 311 aaKnown RBP5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 TMEM168Q9H0V1 697 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 KCND1Q9NSA2 647 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 ARHGAP20Q9P2F6 1191 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 PRAMEF25A6NGN4 478 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 PPP1R12AO14974 1030 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 EFCAB14O75071 495 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 KLHL18O94889 574 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 KNG1P01042 644 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 C4BPAP04003 597 aaKnown RBP5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 CELA3BP08861 270 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 ENO2P09104 434 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 NAT1P18440 290 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 MC4RP32245 332 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 PLP2Q04941 152 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 FAM47CQ5HY64 1035 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 NOSTRINQ8IVI9 506 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 IGSF22Q8N9C0 903 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 UBXN4Q92575 508 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 MRFAP1L1Q96HT8 127 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 WRNIP1Q96S55 665 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 FTSJ1Q9UET6 329 aa5.18□□□□□ -1.58
HMGB1P29-201ENST00000505659 SCDO00767 359 aa5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 FBXO21O94952 628 aa5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 LACTBP83111 547 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 SMAD2Q15796 467 aaKnown RBP5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 OVCH1Q7RTY7 1134 aa5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 GPR155Q7Z3F1 870 aa5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 NLGN4XQ8N0W4 816 aa5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 CELF4Q9BZC1 486 aaKnown RBP5.17□□□□□ -1.58
HMGB1P29-201ENST00000505659 ESYT3A0FGR9 886 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 C9orf118A6NHY6 69 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 KCNQ2O43526 872 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 CYP7B1O75881 506 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 MMEP08473 750 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 KIAA2012Q0VF49 1180 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 NFATC3Q12968 1075 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 ZNF460Q14592 562 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 BORAQ6PGQ7 559 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 HHIPL2Q6UWX4 724 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 EP400NLQ6ZTU2 488 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 FAM124AQ86V42 546 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 LGI4Q8N135 537 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 IGDCC4Q8TDY8 1250 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 PTPN18Q99952 460 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 BTBD7Q9P203 1132 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 ARHGAP28Q9P2N2 729 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 PTPN22Q9Y2R2 807 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 ZDHHC9Q9Y397 364 aa5.16□□□□□ -1.58
HMGB1P29-201ENST00000505659 CCDC163A0A0D9SF12 145 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 RASSF10A6NK89 507 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 PLD2O14939 933 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 GSTA4O15217 222 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 CLASP2O75122 1294 aaKnown RBP5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 DNAJC8O75937 253 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 MPIG6BO95866 241 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 PLATP00750 562 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 ITGB3P05106 788 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 AOAHP28039 575 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 GJA4P35212 333 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 C21orf62-AS1Q17RA5 79 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 TMEM177Q53S58 311 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 PKN3Q6P5Z2 889 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 LRSAM1Q6UWE0 723 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 LIMS2Q7Z4I7 341 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 PRRT2Q7Z6L0 340 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 KBTBD2Q8IY47 623 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 RBM15Q96T37 977 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 TNPO3Q9Y5L0 923 aaKnown RBP5.15□□□□□ -1.59
HMGB1P29-201ENST00000505659 K7ESM1 405 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 GLRX3O76003 335 aaKnown RBP5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 KRT37O76014 449 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 ASMTLO95671 621 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 ZNF888P0CJ79 500 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 SDSP20132 328 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 PTGS1P23219 599 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 IL13RA1P78552 427 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 NFKB2Q00653 900 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 Q6ZUG5 572 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 KLHL36Q8N4N3 616 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 RNPC3Q96LT9 517 aaKnown RBP5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 SSBP3Q9BWW4 388 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 AMNQ9BXJ7 453 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 UCKL1Q9NWZ5 548 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 TMEM260Q9NX78 707 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 PPP4R1LQ9P1A2 415 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 ADAM29Q9UKF5 820 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 ZNF536O15090 1300 aa5.14□□□□□ -1.59
HMGB1P29-201ENST00000505659 H0Y858 1186 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 M0R2C6 588 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 B4GALT4O60513 344 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 CSF2RBP32927 897 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 ADCY8P40145 1251 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 EFEMP1Q12805 493 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 ERICH6BQ5W0A0 696 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 ASB15Q8WXK1 588 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms