RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 NCK2O43639 380 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 GCFC2P16383 781 aaKnown RBP13.19□□□□□ -0.3
HCN3-204ENST00000496230 SREBF1P36956 1147 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
HCN3-204ENST00000496230 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
HCN3-204ENST00000496230 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
HCN3-204ENST00000496230 TRIM49P0CI25 452 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 TRIM49CP0CI26 452 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 VCAM1P19320 739 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 GTF2F1P35269 517 aaKnown RBP eCLIP13.19□□□□□ -0.35e-9■■■■□ 24.9
HCN3-204ENST00000496230 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 LXNQ9BS40 222 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
HCN3-204ENST00000496230 SLC12A3P55017 1021 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 FKBP3Q00688 224 aaKnown RBP13.18□□□□□ -0.3
HCN3-204ENST00000496230 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
HCN3-204ENST00000496230 TEX2Q8IWB9 1127 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
HCN3-204ENST00000496230 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 LAMA3Q16787 3333 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 MOCS3O95396 460 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 USP8P40818 1118 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 ADAMTS1Q9UHI8 967 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 CCP110O43303 1012 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
HCN3-204ENST00000496230 HERVK_113P62684 666 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 TNIP1Q15025 636 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 GUF1Q8N442 669 aaKnown RBP13.18□□□□□ -0.3
HCN3-204ENST00000496230 CAGE1Q8TC20 777 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 JAKMIP2Q96AA8 810 aa13.18□□□□□ -0.3
HCN3-204ENST00000496230 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
HCN3-204ENST00000496230 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
HCN3-204ENST00000496230 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 ARHGEF16Q5VV41 709 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
HCN3-204ENST00000496230 RINT1Q6NUQ1 792 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 MIER3Q7Z3K6 550 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 PRPF38AQ8NAV1 312 aaKnown RBP13.17□□□□□ -0.3
HCN3-204ENST00000496230 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 IGLV3-22A0A075B6J6 115 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 ZNF263O14978 683 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 AKAP3O75969 853 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 RPA1P27694 616 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 SPA17Q15506 151 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 ZCCHC17Q9NP64 241 aaKnown RBP13.17□□□□□ -0.3
HCN3-204ENST00000496230 ARHGAP20Q9P2F6 1191 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 PHF20L1A8MW92 1017 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 CLCN6P51797 869 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 GYS2P54840 703 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 DMTNQ08495 405 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 ARHGAP44Q17R89 818 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
HCN3-204ENST00000496230 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
HCN3-204ENST00000496230 MYO3BQ8WXR4 1341 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 KIF2AO00139 706 aaPredicted RBP13.16□□□□□ -0.3
HCN3-204ENST00000496230 CETN3O15182 167 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 FOSP01100 380 aaPredicted RBP13.16□□□□□ -0.3
HCN3-204ENST00000496230 HOXD13P35453 343 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 FSTL1Q12841 308 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 FAM178BQ8IXR5 827 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 HYOU1Q9Y4L1 999 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 HMGB2P26583 209 aaKnown RBP13.16□□□□□ -0.3
HCN3-204ENST00000496230 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 MTMR1Q13613 665 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
HCN3-204ENST00000496230 NOA1Q8NC60 698 aaKnown RBP13.16□□□□□ -0.3
HCN3-204ENST00000496230 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
HCN3-204ENST00000496230 PHACTR2O75167 634 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms