RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 IGKV6D-21A0A0A0MT36 114 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 H3BRB1 525 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 PPP6R2O75170 966 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 F2P00734 622 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 ME1P48163 572 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 HAUS3Q68CZ6 603 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 PDXDC2PQ6P474 469 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 ATP6V0A1Q93050 837 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 EIF2AK1Q9BQI3 630 aaKnown RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 C16orf70Q9BSU1 422 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 TUT1Q9H6E5 874 aaKnown RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 STARD7Q9NQZ5 370 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 ERAP1Q9NZ08 941 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 FBXO2Q9UK22 296 aaPredicted RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 SRPRBQ9Y5M8 271 aaKnown RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 STK24Q9Y6E0 443 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 MORC2Q9Y6X9 1032 aaPredicted RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 MYH9P35579 1960 aaKnown RBP16.35■□□□□ 0.21
BRCA1-223ENST00000494123 WDR81Q562E7 1941 aa16.35■□□□□ 0.21
BRCA1-223ENST00000494123 DKC1O60832 514 aaKnown RBP eCLIP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 LONP1P36776 959 aaKnown RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 PSEN2P49810 448 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 SLC26A2P50443 739 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 MFSD10Q14728 455 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 PLPPR4Q7Z2D5 763 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 CKAP2LQ8IYA6 745 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 NEK9Q8TD19 979 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 PAWRQ96IZ0 340 aaKnown RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 AK8Q96MA6 479 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 PCYT2Q99447 389 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 MARK3P27448 753 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 QARSP47897 775 aaKnown RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 PSMC5P62195 406 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 PSMC6P62333 389 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 CYP4A11Q02928 519 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 KIAA0753Q2KHM9 967 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 KRT79Q5XKE5 535 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 SNX29Q8TEQ0 813 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 LEO1Q8WVC0 666 aaPredicted RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 KAT2BQ92831 832 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 C11orf49Q9H6J7 331 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 TRPC6Q9Y210 931 aa16.34■□□□□ 0.21
BRCA1-223ENST00000494123 MAFBQ9Y5Q3 323 aaPredicted RBP16.34■□□□□ 0.21
BRCA1-223ENST00000494123 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 PP2D1A8MPX8 630 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 CCT6AP40227 531 aaKnown RBP16.33■□□□□ 0.2
BRCA1-223ENST00000494123 GRIN1Q05586 938 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.2
BRCA1-223ENST00000494123 UGCGQ16739 394 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
BRCA1-223ENST00000494123 TPH2Q8IWU9 490 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 CLIC6Q96NY7 704 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 LXNQ9BS40 222 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 RGL1Q9NZL6 768 aa16.33■□□□□ 0.2
BRCA1-223ENST00000494123 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
BRCA1-223ENST00000494123 CDC25AP30304 524 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 UBA7P41226 1012 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 ITGA7Q13683 1181 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 C7orf31Q8N865 590 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 RASSF8Q8NHQ8 419 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 CDK5RAP3Q96JB5 506 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 FAM167AQ96KS9 214 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
BRCA1-223ENST00000494123 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 GDPD2Q9HCC8 539 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 TUFT1Q9NNX1 390 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 BRCA2P51587 3418 aa16.32■□□□□ 0.2
BRCA1-223ENST00000494123 POTEB3A0JP26 581 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 CUTAO60888 179 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 SLITRK3O94933 977 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 COL6A1P12109 1028 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 TXLNAP40222 546 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 PRKCEQ02156 737 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 ZRSR1Q15695 479 aaKnown RBP16.31■□□□□ 0.2
BRCA1-223ENST00000494123 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 POTEBQ6S5H4 581 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 HSD17B14Q9BPX1 270 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
BRCA1-223ENST00000494123 HAS3O00219 553 aa16.3■□□□□ 0.2
BRCA1-223ENST00000494123 MED24O75448 989 aa16.3■□□□□ 0.2
BRCA1-223ENST00000494123 OATP04181 439 aa16.3■□□□□ 0.2
BRCA1-223ENST00000494123 RPA1P27694 616 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms