RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 KRT40Q6A162 431 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 TANC1Q9C0D5 1861 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 TUBE1Q9UJT0 475 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 MTCH2Q9Y6C9 303 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 CUL9Q8IWT3 2517 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 NID2Q14112 1375 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 MBLAC1A4D2B0 266 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 CCNE2O96020 404 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 IFNAR1P17181 557 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 STAT5BP51692 787 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 EVCP57679 992 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 PLCB4Q15147 1175 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 TAF2Q6P1X5 1199 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 NIPA1Q7RTP0 329 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 PLPPR4Q7Z2D5 763 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 RPAINQ86UA6 219 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 REXO1Q8N1G1 1221 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 RASGRP4Q8TDF6 673 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 UPF3BQ9BZI7 483 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 MTUS1Q9ULD2 1270 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 VCANP13611 3396 aa13.59□□□□□ -0.23
CCHCR1-215ENST00000488920 IGLV3-22A0A075B6J6 115 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 LINC01553A4QN01 128 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 EPB41L2O43491 1005 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 UPP2O95045 317 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 ATG7O95352 703 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 CYP3A4P08684 503 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 GHRP10912 638 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 POU3F3P20264 500 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 GNA11P29992 359 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 GRB10Q13322 594 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 SKIV2LQ15477 1246 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 MCTP2Q6DN12 878 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 RSPH3Q86UC2 560 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 CRYGNQ8WXF5 182 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 RNF26Q9BY78 433 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 IFIH1Q9BYX4 1025 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 FAM49AQ9H0Q0 323 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 PPP4R2Q9NY27 417 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 INSL6Q9Y581 213 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 GBF1Q92538 1859 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 DOCK5Q9H7D0 1870 aa13.58□□□□□ -0.24
CCHCR1-215ENST00000488920 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 BACH1O14867 736 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 DHX15O43143 795 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 ERVK-21P61565 698 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 MGAT3Q09327 533 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 STK3Q13188 491 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 LPIN1Q14693 890 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 PRR16Q569H4 304 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 ABHD15Q6UXT9 468 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 APBB2Q92870 758 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 TNPO1Q92973 898 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 ASB2Q96Q27 587 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 TGS1Q96RS0 853 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 THEGQ9P2T0 379 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 CDY2AQ9Y6F7 541 aa13.57□□□□□ -0.24
CCHCR1-215ENST00000488920 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 IGKV6D-21A0A0A0MT36 114 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 LPXNO60711 386 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 NLRP5P59047 1200 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 MRPS5P82675 430 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 TMEM62Q0P6H9 643 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 TRIM22Q8IYM9 498 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 GDPD5Q8WTR4 605 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 SYMPKQ92797 1274 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 YME1L1Q96TA2 773 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 TSPYL2Q9H2G4 693 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 PCDHA2Q9Y5H9 948 aa13.56□□□□□ -0.24
CCHCR1-215ENST00000488920 ENPP3O14638 875 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 CPLX1O14810 134 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms