RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 KCNK18Q7Z418 384 aa18.92■□□□□ 0.62
NF1-211ENST00000487476 SLAIN1Q8ND83 568 aa18.92■□□□□ 0.62
NF1-211ENST00000487476 RASSF8Q8NHQ8 419 aa18.92■□□□□ 0.62
NF1-211ENST00000487476 DHX58Q96C10 678 aa18.92■□□□□ 0.62
NF1-211ENST00000487476 NRBP1Q9UHY1 535 aa18.92■□□□□ 0.62
NF1-211ENST00000487476 ATG7O95352 703 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 RPA1P27694 616 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 TXLNAP40222 546 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 JAK3P52333 1124 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 PSMC6P62333 389 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 TRMT1LQ7Z2T5 733 aaKnown RBP18.91■□□□□ 0.62
NF1-211ENST00000487476 CCDC60Q8IWA6 550 aaPredicted RBP18.91■□□□□ 0.62
NF1-211ENST00000487476 OR6J1Q8NGC5 347 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 ERMNQ8TAM6 284 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 KIAA1024Q9UPX6 916 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 AKR1A1P14550 325 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 SFNP31947 248 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 CCDC173Q0VFZ6 552 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 LAMC2Q13753 1193 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 E2F4Q16254 413 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 NAALADL2Q58DX5 795 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 SMAP1Q8IYB5 467 aaPredicted RBP18.91■□□□□ 0.62
NF1-211ENST00000487476 PCYT2Q99447 389 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 LXNQ9BS40 222 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 POLR3CQ9BUI4 534 aaPredicted RBP18.91■□□□□ 0.62
NF1-211ENST00000487476 DDX19AQ9NUU7 478 aaKnown RBP18.91■□□□□ 0.62
NF1-211ENST00000487476 SERTAD1Q9UHV2 236 aa18.91■□□□□ 0.62
NF1-211ENST00000487476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.9■□□□□ 0.62
NF1-211ENST00000487476 NOP56O00567 594 aaKnown RBP18.9■□□□□ 0.62
NF1-211ENST00000487476 SUPT20HL2P0C7V6 817 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 TCF7P36402 384 aaPredicted RBP18.9■□□□□ 0.62
NF1-211ENST00000487476 SEPT1Q8WYJ6 367 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 CALML4Q96GE6 196 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 GABBR1Q9UBS5 961 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 SEPT4O43236 478 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 MYCP01106 439 aaPredicted RBP18.9■□□□□ 0.62
NF1-211ENST00000487476 TMEM119Q4V9L6 283 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 HYIQ5T013 277 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 RRAGBQ5VZM2 374 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 TLK2Q86UE8 772 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 TRIM50Q86XT4 487 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 EMID1Q96A84 441 aaPredicted RBP18.9■□□□□ 0.62
NF1-211ENST00000487476 CDK5RAP3Q96JB5 506 aa18.9■□□□□ 0.62
NF1-211ENST00000487476 NKRFO15226 690 aaKnown RBP eCLIP18.89■□□□□ 0.615e-7■□□□□ 11.2
NF1-211ENST00000487476 ACTN4O43707 911 aaKnown RBP18.89■□□□□ 0.61
NF1-211ENST00000487476 MBD3O95983 291 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 P4HBP07237 508 aaKnown RBP18.89■□□□□ 0.61
NF1-211ENST00000487476 PSAPP07602 524 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 ZNF445P59923 1031 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 CAVIN1Q6NZI2 390 aaKnown RBP18.89■□□□□ 0.61
NF1-211ENST00000487476 MIS18BP1Q6P0N0 1132 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 GRAMD1CQ8IYS0 662 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 PPTC7Q8NI37 304 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 PIGOQ8TEQ8 1089 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 E9PMD0 336 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 BACH1O14867 736 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 ZNF862O60290 1169 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 STAT6P42226 847 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 UTP14CQ5TAP6 766 aaKnown RBP18.89■□□□□ 0.61
NF1-211ENST00000487476 CTU1Q7Z7A3 348 aaKnown RBP18.89■□□□□ 0.61
NF1-211ENST00000487476 RDM1Q8NG50 284 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 STAMQ92783 540 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 PPP1R9BQ96SB3 815 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 TUFT1Q9NNX1 390 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 BLOC1S4Q9NUP1 217 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 DNAH12Q6ZR08 3092 aa18.89■□□□□ 0.61
NF1-211ENST00000487476 IGKV6D-21A0A0A0MT36 114 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 TMEM150BA6NC51 233 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 QARSP47897 775 aaKnown RBP18.88■□□□□ 0.61
NF1-211ENST00000487476 BEX3Q00994 111 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 CAMK4Q16566 473 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 MYADML2A6NDP7 307 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 DUSP11O75319 330 aaKnown RBP18.88■□□□□ 0.61
NF1-211ENST00000487476 PGK1P00558 417 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 ATP4AP20648 1035 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 ZSCAN23Q3MJ62 389 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 IQUBQ8NA54 791 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 MTRQ99707 1265 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 SH2D3AQ9BRG2 576 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 TMEM63CQ9P1W3 806 aa18.88■□□□□ 0.61
NF1-211ENST00000487476 CTAGE5O15320 804 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 MMP3P08254 477 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 DHX8Q14562 1220 aaKnown RBP18.87■□□□□ 0.61
NF1-211ENST00000487476 SLC9C1Q4G0N8 1177 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 KRBA2Q6ZNG9 492 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
NF1-211ENST00000487476 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 ZNF302Q9NR11 478 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
NF1-211ENST00000487476 KINO60870 393 aaKnown RBP18.86■□□□□ 0.61
NF1-211ENST00000487476 ZNF286BP0CG31 522 aa18.86■□□□□ 0.61
NF1-211ENST00000487476 PSMC5P62195 406 aa18.86■□□□□ 0.61
NF1-211ENST00000487476 MCM6Q14566 821 aa18.86■□□□□ 0.61
NF1-211ENST00000487476 CNNM3Q8NE01 707 aa18.86■□□□□ 0.61
NF1-211ENST00000487476 NT5C3AQ9H0P0 336 aa18.86■□□□□ 0.61
NF1-211ENST00000487476 AP5M1Q9H0R1 490 aa18.86■□□□□ 0.61
NF1-211ENST00000487476 MAFBQ9Y5Q3 323 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms