RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
U2AF1-211ENST00000486519 HIDE1A8MVS5 230 aa17.8■□□□□ 0.44
U2AF1-211ENST00000486519 SLC3A2P08195 630 aaKnown RBP17.8■□□□□ 0.44
U2AF1-211ENST00000486519 CD52P31358 61 aa17.8■□□□□ 0.44
U2AF1-211ENST00000486519 CDC37Q16543 378 aaPredicted RBP17.8■□□□□ 0.44
U2AF1-211ENST00000486519 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
U2AF1-211ENST00000486519 HINFPQ9BQA5 517 aa17.8■□□□□ 0.44
U2AF1-211ENST00000486519 NR2E1Q9Y466 385 aa17.8■□□□□ 0.44
U2AF1-211ENST00000486519 SNHG28P0DPA3 235 aa17.79■□□□□ 0.44
U2AF1-211ENST00000486519 IBSPP21815 317 aaPredicted RBP17.79■□□□□ 0.44
U2AF1-211ENST00000486519 CDCA3Q99618 268 aaPredicted RBP17.79■□□□□ 0.44
U2AF1-211ENST00000486519 NACAP1Q9BZK3 213 aa17.79■□□□□ 0.44
U2AF1-211ENST00000486519 ERVK-5Q9HDB9 667 aa17.79■□□□□ 0.44
U2AF1-211ENST00000486519 GPR179Q6PRD1 2367 aa17.79■□□□□ 0.44
U2AF1-211ENST00000486519 RAB11FIP3O75154 756 aa17.78■□□□□ 0.44
U2AF1-211ENST00000486519 FGF18O76093 207 aa17.78■□□□□ 0.44
U2AF1-211ENST00000486519 HOXB3P14651 431 aaPredicted RBP17.78■□□□□ 0.44
U2AF1-211ENST00000486519 NPAS4Q8IUM7 802 aa17.78■□□□□ 0.44
U2AF1-211ENST00000486519 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
U2AF1-211ENST00000486519 CDY2AQ9Y6F7 541 aa17.78■□□□□ 0.44
U2AF1-211ENST00000486519 CHD8Q9HCK8 2581 aa17.78■□□□□ 0.44
U2AF1-211ENST00000486519 ABCB11O95342 1321 aa17.77■□□□□ 0.44
U2AF1-211ENST00000486519 ATXN1P54253 815 aaKnown RBP17.77■□□□□ 0.44
U2AF1-211ENST00000486519 VPS53Q5VIR6 699 aa17.77■□□□□ 0.44
U2AF1-211ENST00000486519 MLXIPQ9HAP2 919 aa17.77■□□□□ 0.44
U2AF1-211ENST00000486519 PNMA2Q9UL42 364 aa17.77■□□□□ 0.44
U2AF1-211ENST00000486519 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
U2AF1-211ENST00000486519 CFBP00751 764 aa17.76■□□□□ 0.43
U2AF1-211ENST00000486519 RRP12Q5JTH9 1297 aaKnown RBP17.76■□□□□ 0.43
U2AF1-211ENST00000486519 UTP14CQ5TAP6 766 aaKnown RBP17.76■□□□□ 0.43
U2AF1-211ENST00000486519 TSHZ1Q6ZSZ6 1077 aa17.76■□□□□ 0.43
U2AF1-211ENST00000486519 C12orf76Q8N812 135 aaPredicted RBP17.76■□□□□ 0.43
U2AF1-211ENST00000486519 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
U2AF1-211ENST00000486519 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
U2AF1-211ENST00000486519 C2orf16Q68DN1 1984 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 ORC4O43929 436 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 UBE3AQ05086 875 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 SEMA3FQ13275 785 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 PGM5Q15124 567 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 SIX5Q8N196 739 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 COLGALT1Q8NBJ5 622 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 RASGRP4Q8TDF6 673 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 GPR20Q99678 358 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 ADAM7Q9H2U9 754 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 TMX1Q9H3N1 280 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 AAASQ9NRG9 546 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 ECHDC1Q9NTX5 307 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 ATRXP46100 2492 aa17.75■□□□□ 0.43
U2AF1-211ENST00000486519 ZFYP08048 801 aaPredicted RBP17.74■□□□□ 0.43
U2AF1-211ENST00000486519 FGRP09769 529 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 HSPD1P10809 573 aaKnown RBP17.74■□□□□ 0.43
U2AF1-211ENST00000486519 GNAT1P11488 350 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 HOXA13P31271 388 aaPredicted RBP17.74■□□□□ 0.43
U2AF1-211ENST00000486519 HSD17B4P51659 736 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 SPOUT1Q5T280 376 aaKnown RBP17.74■□□□□ 0.43
U2AF1-211ENST00000486519 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 ADGRF4Q8IZF3 695 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 ZDHHC14Q8IZN3 488 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 TDRD5Q8NAT2 981 aaKnown RBP17.74■□□□□ 0.43
U2AF1-211ENST00000486519 SUMF1Q8NBK3 374 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 RUBCNQ92622 972 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 SEMA4AQ9H3S1 761 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 HCFC2Q9Y5Z7 792 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 CACNA1IQ9P0X4 2223 aa17.74■□□□□ 0.43
U2AF1-211ENST00000486519 DCDC2BA2VCK2 349 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 NARSO43776 548 aaKnown RBP17.73■□□□□ 0.43
U2AF1-211ENST00000486519 SCG2P13521 617 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 HOXB8P17481 243 aaPredicted RBP17.73■□□□□ 0.43
U2AF1-211ENST00000486519 MARCH8Q5T0T0 291 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 RARS2Q5T160 578 aaKnown RBP17.73■□□□□ 0.43
U2AF1-211ENST00000486519 FAM102BQ5T8I3 360 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 THNSL1Q8IYQ7 743 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 TCF25Q9BQ70 676 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 TOMM22Q9NS69 142 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 PCDHB12Q9Y5F1 795 aa17.73■□□□□ 0.43
U2AF1-211ENST00000486519 COL4A3Q01955 1670 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 MGEA5O60502 916 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 PBX3P40426 434 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 SP4Q02446 784 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 TMEM62Q0P6H9 643 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 ZMYM1Q5SVZ6 1142 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 CYFIP1Q7L576 1253 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 MCF2L2Q86YR7 1114 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 RTP3Q9BQQ7 232 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 USP26Q9BXU7 913 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 CWH43Q9H720 699 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 TCP11L1Q9NUJ3 509 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 TYW1Q9NV66 732 aaKnown RBP17.72■□□□□ 0.43
U2AF1-211ENST00000486519 PADI3Q9ULW8 664 aa17.72■□□□□ 0.43
U2AF1-211ENST00000486519 TBKBP1A7MCY6 615 aa17.71■□□□□ 0.43
U2AF1-211ENST00000486519 NOP56O00567 594 aaKnown RBP17.71■□□□□ 0.43
U2AF1-211ENST00000486519 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
U2AF1-211ENST00000486519 SP9P0CG40 484 aa17.71■□□□□ 0.43
U2AF1-211ENST00000486519 SRGAP2BP0DMP2 458 aa17.71■□□□□ 0.43
U2AF1-211ENST00000486519 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
U2AF1-211ENST00000486519 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
U2AF1-211ENST00000486519 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms