RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 RRN3P2A6NIE6 340 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 RPLP2P05387 115 aaKnown RBP12.73□□□□□ -0.37
SORT1-204ENST00000482236 PSAPP07602 524 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 RBL2Q08999 1139 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 TRIM29Q14134 588 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 CCDC85BQ15834 202 aaPredicted RBP12.73□□□□□ -0.37
SORT1-204ENST00000482236 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 FBXL16Q8N461 479 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 WASF1Q92558 559 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 WNT8BQ93098 351 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 YME1L1Q96TA2 773 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 AGXT2Q9BYV1 514 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 ZNF302Q9NR11 478 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 TBC1D22BQ9NU19 505 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 GINS2Q9Y248 185 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 TELO2Q9Y4R8 837 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 MEIS1O00470 390 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 GAS7O60861 476 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 UPP2O95045 317 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 GHRP10912 638 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
SORT1-204ENST00000482236 ANAPC15P60006 121 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 DEFB103AP81534 67 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 KRT76Q01546 638 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 ITGB3BPQ13352 177 aaPredicted RBP12.72□□□□□ -0.37
SORT1-204ENST00000482236 PKN1Q16512 942 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 TRIM71Q2Q1W2 868 aaKnown RBP12.72□□□□□ -0.37
SORT1-204ENST00000482236 IER5Q5VY09 327 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 TMCO2Q7Z6W1 182 aaPredicted RBP12.72□□□□□ -0.37
SORT1-204ENST00000482236 DBF4BQ8NFT6 615 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 APBB2Q92870 758 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 SCLT1Q96NL6 688 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 CTAGE1Q96RT6 745 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
SORT1-204ENST00000482236 PCDHA4Q9UN74 947 aa12.72□□□□□ -0.37
SORT1-204ENST00000482236 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 CXCL10P02778 98 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 INSRRP14616 1297 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 SLC26A2P50443 739 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 FOSBP53539 338 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 TMEM62Q0P6H9 643 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 HIC1Q14526 733 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.37
SORT1-204ENST00000482236 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 RUFY4Q6ZNE9 571 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 KRT25Q7Z3Z0 450 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 BLIDQ8IZY5 108 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 DNAJB3Q8WWF6 145 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 TEKT3Q9BXF9 490 aa12.71□□□□□ -0.37
SORT1-204ENST00000482236 SCN5AQ14524 2016 aa12.71□□□□□ -0.38
SORT1-204ENST00000482236 DOCK5Q9H7D0 1870 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 DLL1O00548 723 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 CYP3A4P08684 503 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 NEK4P51957 841 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 AK2P54819 239 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
SORT1-204ENST00000482236 PLCB4Q15147 1175 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 PLPPR4Q7Z2D5 763 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 SMAP1Q8IYB5 467 aaPredicted RBP12.7□□□□□ -0.38
SORT1-204ENST00000482236 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 TBCKQ8TEA7 893 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 TRAPPC12Q8WVT3 735 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 RAD9AQ99638 391 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
SORT1-204ENST00000482236 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
SORT1-204ENST00000482236 CEP131Q9UPN4 1083 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 CDY2AQ9Y6F7 541 aa12.7□□□□□ -0.38
SORT1-204ENST00000482236 SZT2Q5T011 3432 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 HBP1O60381 514 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 EVCP57679 992 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 SCRN1Q12765 414 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 PAK2Q13177 524 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 NTRK3Q16288 839 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
SORT1-204ENST00000482236 ATP8B4Q8TF62 1192 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 FAM167AQ96KS9 214 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 MAP7D2Q96T17 732 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 PPP1R16BQ96T49 567 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 GABBR1Q9UBS5 961 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 KCNJ14Q9UNX9 436 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 TRPV2Q9Y5S1 764 aa12.69□□□□□ -0.38
SORT1-204ENST00000482236 GJB5O95377 273 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 CCNE2O96020 404 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 HOXC8P31273 242 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 USP11P51784 963 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 JAK3P52333 1124 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
SORT1-204ENST00000482236 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
SORT1-204ENST00000482236 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms