RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	TTC3	P53804	2025 aa		5.74	□□□□□ -1.49
HDAC6-223	ENST00000480525	IGKV6-21	A0A0C4DH24	114 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	SMIM35	A0A1B0GVV1	85 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	STX6	O43752	255 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	CCNT1	O60563	726 aa	Known RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	TDP2	O95551	362 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	CCNE2	O96020	404 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	TIMP1	P01033	207 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	P4HB	P07237	508 aa	Known RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	OR52Z1	P0C646	297 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	RPA1	P27694	616 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	NASP	P49321	788 aa	Predicted RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	PSEN2	P49810	448 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	STAT5B	P51692	787 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	RTP1	P59025	263 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	PSMC5	P62195	406 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	POU5F1B	Q06416	359 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	FAAP100	Q0VG06	881 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	MFSD10	Q14728	455 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	EPHA7	Q15375	998 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	TARBP2	Q15633	366 aa	Known RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	LRRC26	Q2I0M4	334 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	KIAA0753	Q2KHM9	967 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	TMEM266	Q2M3C6	531 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	LETM2	Q2VYF4	491 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	XKR3	Q5GH77	459 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	FAM26D	Q5JW98	314 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	TTC38	Q5R3I4	469 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	HYI	Q5T013	277 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	MFSD5	Q6N075	450 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	CXCL17	Q6UXB2	119 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	NOL8	Q76FK4	1167 aa	Known RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	C4orf32	Q8N8J7	132 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	ERMN	Q8TAM6	284 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	CYP2W1	Q8TAV3	490 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	RASGRP4	Q8TDF6	673 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	DIS3L	Q8TF46	1054 aa	Known RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	FERMT2	Q96AC1	680 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	HSD17B14	Q9BPX1	270 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	LARP6	Q9BRS8	491 aa	Known RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	TUFT1	Q9NNX1	390 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	PDLIM7	Q9NR12	457 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	RTEL1	Q9NZ71	1219 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	KCND2	Q9NZV8	630 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	KCNG1	Q9UIX4	513 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	PHLPP2	Q6ZVD8	1323 aa		5.73	□□□□□ -1.49
HDAC6-223	ENST00000480525	ZMYM2	Q9UBW7	1377 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ADAMTS3	O15072	1205 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	SLC37A4	O43826	429 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	PPP6R2	O75170	966 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	BAIAP3	O94812	1187 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	YEATS4	O95619	227 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	CXCL10	P02778	98 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ABCD1	P33897	745 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	DDIT3	P35638	169 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	RFC5	P40937	340 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	QARS	P47897	775 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	TOB1	P50616	345 aa	Predicted RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	TLE2	Q04725	743 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	GNL2	Q13823	731 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	CALCRL	Q16602	461 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	TRIM71	Q2Q1W2	868 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	NBPF20	Q3BBV1	942 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	EARS2	Q5JPH6	523 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ODR4	Q5SWX8	454 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	RSPH3	Q86UC2	560 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	LINC01465	Q8N7H1	131 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	C7orf31	Q8N865	590 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ZNF579	Q8NAF0	562 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	COPS5	Q92905	334 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	LENG1	Q96BZ8	264 aa	Predicted RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	CTAGE1	Q96RT6	745 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	CEP89	Q96ST8	783 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	PCYT2	Q99447	389 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	GDF15	Q99988	308 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	PYM1	Q9BRP8	204 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	NOC4L	Q9BVI4	516 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	TIPIN	Q9BVW5	301 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	NFKBIZ	Q9BYH8	718 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	NT5C3A	Q9H0P0	336 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ZSWIM4	Q9H7M6	989 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	TTC12	Q9H892	705 aa	Predicted RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	C17orf75	Q9HAS0	396 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ZNF302	Q9NR11	478 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	NRBP2	Q9NSY0	501 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	ANKEF1	Q9NU02	776 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	RNF216	Q9NWF9	866 aa	Predicted RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	PRKAG2	Q9UGJ0	569 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	DBR1	Q9UK59	544 aa	Known RBP	5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	MTMR6	Q9Y217	621 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	PCDHA2	Q9Y5H9	948 aa		5.72	□□□□□ -1.49
HDAC6-223	ENST00000480525	RALGAPA2	Q2PPJ7	1873 aa		5.71	□□□□□ -1.5
HDAC6-223	ENST00000480525	SCN5A	Q14524	2016 aa		5.71	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM265	A0A087WTH1	108 aa		5.71	□□□□□ -1.5
HDAC6-223	ENST00000480525	POTEB3	A0JP26	581 aa		5.71	□□□□□ -1.5
HDAC6-223	ENST00000480525	C17orf102	A2RUQ5	167 aa		5.71	□□□□□ -1.5
HDAC6-223	ENST00000480525	CARNS1	A5YM72	827 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms