RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZDHHC5Q9C0B5 715 aa8.04□□□□□ -1.12
VPS50-212ENST00000476413 NUB1Q9Y5A7 615 aa8.04□□□□□ -1.12
VPS50-212ENST00000476413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.03□□□□□ -1.12
VPS50-212ENST00000476413 HYAL3O43820 417 aaPredicted RBP8.03□□□□□ -1.12
VPS50-212ENST00000476413 CYP17A1P05093 508 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 THBS2P35442 1172 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 FNTBP49356 437 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 GRIN1Q05586 938 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 PIN1Q13526 163 aaPredicted RBP8.03□□□□□ -1.12
VPS50-212ENST00000476413 RPTNQ6XPR3 784 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 ZBTB46Q86UZ6 589 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 ABHD4Q8TB40 342 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 PEX11GQ96HA9 241 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 CDH19Q9H159 772 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 RIC8BQ9NVN3 520 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 TCEAL9Q9UHQ7 104 aa8.03□□□□□ -1.12
VPS50-212ENST00000476413 F8W031 263 aaPredicted RBP8.02□□□□□ -1.13
VPS50-212ENST00000476413 ABLIM3O94929 683 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 SCGB1D2O95969 90 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 MT-CO1P00395 513 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 TMEM253P0C7T8 217 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 MOGSQ13724 837 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 LRP8Q14114 963 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 EPHA7Q15375 998 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 PTPN21Q16825 1174 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 CCDC181Q5TID7 509 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 EP400NLQ6ZTU2 488 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 NOL8Q76FK4 1167 aaKnown RBP8.02□□□□□ -1.13
VPS50-212ENST00000476413 TRIM48Q8IWZ4 208 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 C1orf162Q8NEQ5 155 aaPredicted RBP8.02□□□□□ -1.13
VPS50-212ENST00000476413 LMBR1Q8WVP7 490 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 RTF1Q92541 710 aaKnown RBP8.02□□□□□ -1.13
VPS50-212ENST00000476413 TSPAN17Q96FV3 270 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 FUBP3Q96I24 572 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS50-212ENST00000476413 SLC13A1Q9BZW2 595 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 ZIM2Q9NZV7 527 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 NUDT5Q9UKK9 219 aa8.02□□□□□ -1.13
VPS50-212ENST00000476413 NUDT19A8MXV4 375 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 MYBL2P10244 700 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 GPR3P46089 330 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 PPP2R5AQ15172 486 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 PAN2Q504Q3 1202 aaKnown RBP8.01□□□□□ -1.13
VPS50-212ENST00000476413 ASB15Q8WXK1 588 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 FOXRED1Q96CU9 486 aaPredicted RBP8.01□□□□□ -1.13
VPS50-212ENST00000476413 INTS4Q96HW7 963 aaKnown RBP8.01□□□□□ -1.13
VPS50-212ENST00000476413 ZNF496Q96IT1 587 aaPredicted RBP8.01□□□□□ -1.13
VPS50-212ENST00000476413 RHOBTB2Q9BYZ6 727 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 SEMA4AQ9H3S1 761 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 AASDHPPTQ9NRN7 309 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
VPS50-212ENST00000476413 PRAMEF25A6NGN4 478 aa8□□□□□ -1.13
VPS50-212ENST00000476413 FOXP2O15409 715 aa8□□□□□ -1.13
VPS50-212ENST00000476413 H2AFYO75367 372 aaKnown RBP8□□□□□ -1.13
VPS50-212ENST00000476413 ZBTB7AO95365 584 aa8□□□□□ -1.13
VPS50-212ENST00000476413 MMEP08473 750 aa8□□□□□ -1.13
VPS50-212ENST00000476413 FAHP16930 419 aa8□□□□□ -1.13
VPS50-212ENST00000476413 CD40P25942 277 aa8□□□□□ -1.13
VPS50-212ENST00000476413 SCAND1P57086 179 aa8□□□□□ -1.13
VPS50-212ENST00000476413 PRR5P85299 388 aa8□□□□□ -1.13
VPS50-212ENST00000476413 NR1I3Q14994 352 aa8□□□□□ -1.13
VPS50-212ENST00000476413 PCBP2Q15366 365 aaKnown RBP eCLIP8□□□□□ -1.13
VPS50-212ENST00000476413 PLEKHN1Q494U1 663 aaPredicted RBP8□□□□□ -1.13
VPS50-212ENST00000476413 CBLL1Q75N03 491 aa8□□□□□ -1.13
VPS50-212ENST00000476413 RTN4RL1Q86UN2 441 aaPredicted RBP8□□□□□ -1.13
VPS50-212ENST00000476413 ORAI2Q96SN7 254 aa8□□□□□ -1.13
VPS50-212ENST00000476413 BTBD7Q9P203 1132 aa8□□□□□ -1.13
VPS50-212ENST00000476413 KLHL14Q9P2G3 628 aa8□□□□□ -1.13
VPS50-212ENST00000476413 NOC2LQ9Y3T9 749 aaKnown RBP8□□□□□ -1.13
VPS50-212ENST00000476413 TRIM75PA6NK02 468 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA12O60330 932 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 KDM1AO60341 852 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 MPOP05164 745 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 RBP3P10745 1247 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 AFMP43652 599 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 MAPKAPK2P49137 400 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 HERVK_113P62684 666 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 KRT85P78386 507 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 HSP90AB2PQ58FF8 381 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 ZMYM1Q5SVZ6 1142 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 ADGRF1Q5T601 910 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 FRMD7Q6ZUT3 714 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 MIB1Q86YT6 1006 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 ZZZ3Q8IYH5 903 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 FAXDC2Q96IV6 333 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 CAMKK2Q96RR4 588 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 BCAS3Q9H6U6 928 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA9Q9Y5G4 932 aaKnown RBP7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA8Q9Y5G5 932 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA7Q9Y5G6 932 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA6Q9Y5G7 932 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA3Q9Y5H0 932 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 PCDHGA2Q9Y5H1 932 aa7.99□□□□□ -1.13
VPS50-212ENST00000476413 E2F8A0AVK6 867 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 LRG1P02750 347 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 YBX1P67809 324 aaKnown RBP7.98□□□□□ -1.13
VPS50-212ENST00000476413 SLC9A5Q14940 896 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 ODF1Q14990 250 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 RAB3GAP1Q15042 981 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 FAM126BQ8IXS8 530 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms