RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 JAK3P52333 1124 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 RESTQ13127 1097 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 GDF6Q6KF10 455 aaPredicted RBP17.09■□□□□ 0.33
FDPS-210ENST00000474345 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
FDPS-210ENST00000474345 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
FDPS-210ENST00000474345 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
FDPS-210ENST00000474345 ZMYND8Q9ULU4 1186 aaPredicted RBP17.09■□□□□ 0.33
FDPS-210ENST00000474345 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
FDPS-210ENST00000474345 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 BACH1O14867 736 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
FDPS-210ENST00000474345 CLTBP09497 229 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 SMIM10L2AP0DMW4 78 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 SMIM10L2BP0DMW5 78 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 MARK3P27448 753 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
FDPS-210ENST00000474345 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 PTGDRQ13258 359 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.32
FDPS-210ENST00000474345 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 SETD4Q9NVD3 440 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.32
FDPS-210ENST00000474345 H0YGN5 161 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 KIAA0355O15063 1070 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
FDPS-210ENST00000474345 SYN1P17600 705 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 TECP42680 631 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 SLC26A2P50443 739 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 EPHA7Q15375 998 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 PTGISQ16647 500 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
FDPS-210ENST00000474345 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 CYP2C9P11712 490 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 INSRRP14616 1297 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 HOXC8P31273 242 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 ADAM17P78536 824 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 NCAPH2Q6IBW4 605 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
FDPS-210ENST00000474345 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
FDPS-210ENST00000474345 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
FDPS-210ENST00000474345 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 TREHO43280 583 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 ZNF862O60290 1169 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 STBD1O95210 358 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
FDPS-210ENST00000474345 ITGB8P26012 769 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 PKP1Q13835 747 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 IL17AQ16552 155 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 UGCGQ16739 394 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
FDPS-210ENST00000474345 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
FDPS-210ENST00000474345 NRCAMQ92823 1304 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 LAD1O00515 517 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 HBP1O60381 514 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 SLITRK3O94933 977 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
FDPS-210ENST00000474345 GNAT1P11488 350 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 ATP2C1P98194 919 aaPredicted RBP17.04■□□□□ 0.32
FDPS-210ENST00000474345 PPFIA1Q13136 1202 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 GRIK4Q16099 956 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
FDPS-210ENST00000474345 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
FDPS-210ENST00000474345 BANK1Q8NDB2 785 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 LMBR1Q8WVP7 490 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
FDPS-210ENST00000474345 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
FDPS-210ENST00000474345 ATP6V0A1Q93050 837 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
FDPS-210ENST00000474345 RRN3P2A6NIE6 340 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 TIMP1P01033 207 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 PRPHP41219 470 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
FDPS-210ENST00000474345 PSMC5P62195 406 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 IGBP1P78318 339 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
FDPS-210ENST00000474345 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 MARCH8Q5T0T0 291 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
FDPS-210ENST00000474345 DYDC2Q96IM9 177 aa17.03■□□□□ 0.32
FDPS-210ENST00000474345 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms