RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MAD2L2Q9UI95 211 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 TELO2Q9Y4R8 837 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 CDY2AQ9Y6F7 541 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 LAMA4Q16363 1823 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 KIAA1671Q9BY89 1806 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 SDSP20132 328 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 MARK3P27448 753 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 AVPR2P30518 371 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 CD52P31358 61 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 MGAT3Q09327 533 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 CBX2Q14781 532 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 FBXO47Q5MNV8 452 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 SPOUT1Q5T280 376 aaKnown RBP21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 INPP4AQ96PE3 977 aaPredicted RBP21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 TUBE1Q9UJT0 475 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 LRFN2Q9ULH4 789 aa21.9■■□□□ 1.1
NCKIPSD-209ENST00000470006 PTPRZ1P23471 2315 aaPredicted RBP21.89■■□□□ 1.1
NCKIPSD-209ENST00000470006 STAG3L1P0CL83 205 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 IGBP1P78318 339 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 SEMA3FQ13275 785 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 GRIK4Q16099 956 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 CWC27Q6UX04 472 aaKnown RBP21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 NPAS4Q8IUM7 802 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 CNNM2Q9H8M5 875 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 PCDHGC5Q9Y5F6 944 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 CACNA1HO95180 2353 aa21.89■■□□□ 1.09
NCKIPSD-209ENST00000470006 SPTBN4Q9H254 2564 aa21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 H0Y858 1186 aa21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 PER2O15055 1255 aa21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 TCF7P36402 384 aaPredicted RBP21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 PIBF1Q8WXW3 757 aa21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 GLG1Q92896 1179 aa21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 FAM49AQ9H0Q0 323 aaPredicted RBP21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 TLR9Q9NR96 1032 aa21.88■■□□□ 1.09
NCKIPSD-209ENST00000470006 PALM3A6NDB9 673 aaPredicted RBP21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 GLP2RO95838 553 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 MRPS6P82932 125 aaKnown RBP21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 FOXK2Q01167 660 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 IER5Q5VY09 327 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 NLRX1Q86UT6 975 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 GIMAP8Q8ND71 665 aaPredicted RBP21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 SMARCC2Q8TAQ2 1214 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 FTHL17Q9BXU8 183 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 AGO3Q9H9G7 860 aaKnown RBP21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 DIAPH3Q9NSV4 1193 aa21.87■■□□□ 1.09
NCKIPSD-209ENST00000470006 PNMA6FA0A0J9YX94 578 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 M0QZ92 97 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 LINC01599Q8WXQ3 324 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 CUL5Q93034 780 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 ASIC4Q96FT7 647 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 NEK1Q96PY6 1258 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 SENP7Q9BQF6 1050 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 ERAP1Q9NZ08 941 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 PCDHB12Q9Y5F1 795 aa21.86■■□□□ 1.09
NCKIPSD-209ENST00000470006 SP100P23497 879 aaPredicted RBP21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 GATMP50440 423 aa21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 RBM10P98175 930 aaKnown RBP21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 TMEM62Q0P6H9 643 aa21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 PTPN21Q16825 1174 aa21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 RTN4RL1Q86UN2 441 aaPredicted RBP21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 RIOX1Q9H6W3 641 aa21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 PLXNA4Q9HCM2 1894 aa21.85■■□□□ 1.09
NCKIPSD-209ENST00000470006 LOXHD1Q8IVV2 1947 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 SCG2P13521 617 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 ATF7P17544 494 aaPredicted RBP21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 PAK2Q13177 524 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 SEPT1Q8WYJ6 367 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 APOL5Q9BWW9 433 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 LNPKQ9C0E8 428 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 AAASQ9NRG9 546 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 PKD2L1Q9P0L9 805 aa21.84■■□□□ 1.09
NCKIPSD-209ENST00000470006 FRMPD4Q14CM0 1322 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 SRGAP2BP0DMP2 458 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 GRM4Q14833 912 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 SEC23AQ15436 765 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 PCNX4Q63HM2 1172 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 ZBTB10Q96DT7 871 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 SMARCAD1Q9H4L7 1026 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 PADI3Q9ULW8 664 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 PCDHB7Q9Y5E2 793 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 TRPV2Q9Y5S1 764 aa21.83■■□□□ 1.09
NCKIPSD-209ENST00000470006 FSD2A1L4K1 749 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 MBLAC1A4D2B0 266 aaPredicted RBP21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 PDGFBP01127 241 aaPredicted RBP21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 RPLP2P05387 115 aaKnown RBP21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 SLC35G1Q2M3R5 365 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 MARCH8Q5T0T0 291 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 CYB5R4Q7L1T6 521 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 RIPOR3Q96MK2 946 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 DSCC1Q9BVC3 393 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 TSHZ2Q9NRE2 1034 aa21.82■■□□□ 1.08
NCKIPSD-209ENST00000470006 ERICH2A1L162 156 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 RRN3P2A6NIE6 340 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 TECP42680 631 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 UBE3AQ05086 875 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 TRDNQ13061 729 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 THNSL1Q8IYQ7 743 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms