RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
GPC1-207ENST00000466624 SRPRBQ9Y5M8 271 aaKnown RBP17.99■□□□□ 0.47
GPC1-207ENST00000466624 MAFBQ9Y5Q3 323 aaPredicted RBP17.99■□□□□ 0.47
GPC1-207ENST00000466624 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 POTEMA6NI47 508 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 H3BRB1 525 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 SPTLC2O15270 562 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 ZNF286BP0CG31 522 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 LONP1P36776 959 aaKnown RBP17.98■□□□□ 0.47
GPC1-207ENST00000466624 STAT5BP51692 787 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
GPC1-207ENST00000466624 SWSAP1Q6NVH7 229 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 NECAB2Q7Z6G3 386 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 ERMNQ8TAM6 284 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 GLG1Q92896 1179 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 ATP6V0A1Q93050 837 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 TUT1Q9H6E5 874 aaKnown RBP17.98■□□□□ 0.47
GPC1-207ENST00000466624 C11orf49Q9H6J7 331 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 STARD7Q9NQZ5 370 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 LRWD1Q9UFC0 647 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 RCOR1Q9UKL0 485 aa17.98■□□□□ 0.47
GPC1-207ENST00000466624 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 BACH1O14867 736 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 DKC1O60832 514 aaKnown RBP eCLIP17.97■□□□□ 0.47
GPC1-207ENST00000466624 P4HBP07237 508 aaKnown RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 MUTP22033 750 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 PSEN2P49810 448 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 SOX10P56693 466 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 MFSD10Q14728 455 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 FOXD4L6Q3SYB3 417 aaPredicted RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 C1orf53Q5VUE5 145 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 HAUS3Q68CZ6 603 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 FOXD4L3Q6VB84 417 aaPredicted RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 DIS3LQ8TF46 1054 aaKnown RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 PAWRQ96IZ0 340 aaKnown RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 HSD17B14Q9BPX1 270 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 GABBR1Q9UBS5 961 aa17.97■□□□□ 0.47
GPC1-207ENST00000466624 FBXO2Q9UK22 296 aaPredicted RBP17.97■□□□□ 0.47
GPC1-207ENST00000466624 A0A0U1RQG5 324 aaPredicted RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 SLC26A4O43511 780 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 QARSP47897 775 aaKnown RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 PSMC5P62195 406 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 PTPN11Q06124 597 aaPredicted RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 NFRKBQ6P4R8 1299 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 KRI1Q8N9T8 703 aaKnown RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 SLC43A3Q8NBI5 491 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 TNPO1Q92973 898 aaKnown RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 FAM167AQ96KS9 214 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 EIF2AK1Q9BQI3 630 aaKnown RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 POLR3CQ9BUI4 534 aaPredicted RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 SENP6Q9GZR1 1112 aaPredicted RBP17.96■□□□□ 0.47
GPC1-207ENST00000466624 TUFT1Q9NNX1 390 aa17.96■□□□□ 0.47
GPC1-207ENST00000466624 LYPLA2O95372 231 aa17.95■□□□□ 0.46
GPC1-207ENST00000466624 RPA1P27694 616 aa17.95■□□□□ 0.46
GPC1-207ENST00000466624 MARCKSP29966 332 aaPredicted RBP17.95■□□□□ 0.46
GPC1-207ENST00000466624 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
GPC1-207ENST00000466624 SNX17Q15036 470 aa17.95■□□□□ 0.46
GPC1-207ENST00000466624 PDXDC2PQ6P474 469 aa17.95■□□□□ 0.46
GPC1-207ENST00000466624 LXNQ9BS40 222 aa17.95■□□□□ 0.46
GPC1-207ENST00000466624 ARID2Q68CP9 1835 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 SLITRK3O94933 977 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 NCLP19338 710 aaKnown RBP17.94■□□□□ 0.46
GPC1-207ENST00000466624 ATP4AP20648 1035 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 PLCB4Q15147 1175 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 UGCGQ16739 394 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 NBPF20Q3BBV1 942 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 KRT79Q5XKE5 535 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 SLC39A5Q6ZMH5 540 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 C4orf19Q8IY42 314 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 KCTD17Q8N5Z5 321 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 ZNF579Q8NAF0 562 aaKnown RBP17.94■□□□□ 0.46
GPC1-207ENST00000466624 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 LEO1Q8WVC0 666 aaPredicted RBP17.94■□□□□ 0.46
GPC1-207ENST00000466624 BBXQ8WY36 941 aaPredicted RBP17.94■□□□□ 0.46
GPC1-207ENST00000466624 DYDC2Q96IM9 177 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 SPATA32Q96LK8 384 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 ZSWIM4Q9H7M6 989 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 GRIN2DO15399 1336 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 ALPK3Q96L96 1907 aa17.94■□□□□ 0.46
GPC1-207ENST00000466624 ARVCFO00192 962 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 ZNF862O60290 1169 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 HBP1O60381 514 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 CUTAO60888 179 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 OATP04181 439 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 SPATA31C1P0DKV0 1188 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 HOXC8P31273 242 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 CDK7P50613 346 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 PSMC6P62333 389 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 PRKCEQ02156 737 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 GRIN1Q05586 938 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 XKR3Q5GH77 459 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 HYIQ5T013 277 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
GPC1-207ENST00000466624 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms