RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NRBP2Q9NSY0 501 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 PCDHB6Q9Y5E3 794 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 NRCAMQ92823 1304 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 TANC1Q9C0D5 1861 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 POTEB3A0JP26 581 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 C17orf102A2RUQ5 167 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 RRN3P2A6NIE6 340 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 M0QZ92 97 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 CTAGE5O15320 804 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 DHX15O43143 795 aaKnown RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 LGR5O75473 907 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 ATG7O95352 703 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 CCNE2O96020 404 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 P4HBP07237 508 aaKnown RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 CLTBP09497 229 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 NCLP19338 710 aaKnown RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 PTGS1P23219 599 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 MARK3P27448 753 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 TECP42680 631 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 QARSP47897 775 aaKnown RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 RGS19P49795 217 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 MNX1P50219 401 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 PSMC5P62195 406 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 PSMC6P62333 389 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 KRT85P78386 507 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 RESTQ13127 1097 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 PPFIA1Q13136 1202 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 BFSP2Q13515 415 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 PDIA5Q14554 519 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 SNX17Q15036 470 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 STK38Q15208 465 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 EPHA7Q15375 998 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 FOXD4L5Q5VV16 416 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 KRT79Q5XKE5 535 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 POTEBQ6S5H4 581 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 ABHD15Q6UXT9 468 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 ANKRD33Q7Z3H0 272 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 UBE2Q1Q7Z7E8 422 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 RSPH3Q86UC2 560 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 SESTD1Q86VW0 696 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 C7orf61Q8IZ16 206 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 RETREG2Q8NC44 543 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 FOXD4L4Q8WXT5 416 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 BBXQ8WY36 941 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 CDK5RAP3Q96JB5 506 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 AK8Q96MA6 479 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 MTMR9Q96QG7 549 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 LBHD1Q9BQE6 289 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 JPH2Q9BR39 696 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 C16orf70Q9BSU1 422 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 UNC45AQ9H3U1 944 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 ZSWIM4Q9H7M6 989 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 PRDM5Q9NQX1 630 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 GABBR1Q9UBS5 961 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 LRWD1Q9UFC0 647 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 GTF2IRD1Q9UHL9 959 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 CIZ1Q9ULV3 898 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-206ENST00000462613 KDM3AQ9Y4C1 1321 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 COL1A2P08123 1366 aa7.16□□□□□ -1.26
SF3B1-206ENST00000462613 IGKV6D-21A0A0A0MT36 114 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 VWA3AA6NCI4 1184 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 POTEMA6NI47 508 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 HAS3O00219 553 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 EDIL3O43854 480 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 YEATS4O95619 227 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 OATP04181 439 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 SMIM10L2AP0DMW4 78 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 SMIM10L2BP0DMW5 78 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 RAG1P15918 1043 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 MUTP22033 750 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TMOD1P28289 359 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 UBA7P41226 1012 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TOB1P50616 345 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 FXR2P51116 673 aaKnown RBP eCLIP7.15□□□□□ -1.264e-8■■□□□ 13.2
SF3B1-206ENST00000462613 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 ATP2C1P98194 919 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 PRKCEQ02156 737 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 CEBPZQ03701 1054 aaKnown RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TLE2Q04725 743 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 NBR1Q14596 966 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 PTGISQ16647 500 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 LRRC26Q2I0M4 334 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TRIM60Q495X7 471 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 XKR3Q5GH77 459 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 ZNF484Q5JVG2 852 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TAF2Q6P1X5 1199 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TRMT1LQ7Z2T5 733 aaKnown RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 CCDC60Q8IWA6 550 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TPH2Q8IWU9 490 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 ATP8B4Q8TF62 1192 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 HAS1Q92839 578 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 CALML4Q96GE6 196 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 NT5C3AQ9H0P0 336 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TMEM60Q9H2L4 133 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 BCAS3Q9H6U6 928 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TUFT1Q9NNX1 390 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TMEM39AQ9NV64 488 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms