RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CAPRIN2Q6IMN6 1127 aaKnown RBP15.23■□□□□ 0.03
VPS52-212ENST00000445902 DAAM2Q86T65 1068 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 PNMA1Q8ND90 353 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 KCNV2Q8TDN2 545 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 ZNF384Q8TF68 577 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 AZI2Q9H6S1 392 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 CYTH3O43739 400 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 PPP1R2P41236 205 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 GRB10Q13322 594 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 PRPF4BQ13523 1007 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 PEX26Q7Z412 305 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS52-212ENST00000445902 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 CDK5RAP3Q96JB5 506 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 TSG101Q99816 390 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 THRAP3Q9Y2W1 955 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 COL4A3BPQ9Y5P4 624 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 POTEMA6NI47 508 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 UNC13DQ70J99 1090 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 ERICH1Q86X53 443 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 DZIP3Q86Y13 1208 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 GUF1Q8N442 669 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 ATXN2LQ8WWM7 1075 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 FMO2Q99518 471 aa15.22■□□□□ 0.03
VPS52-212ENST00000445902 CNOT10Q9H9A5 744 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS52-212ENST00000445902 UTP11Q9Y3A2 253 aaKnown RBP15.22■□□□□ 0.03
VPS52-212ENST00000445902 IGF2BP3O00425 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
VPS52-212ENST00000445902 EPS15P42566 896 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 MGARPQ8TDB4 240 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 ACTRT1Q8TDG2 376 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 PBKQ96KB5 322 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 NUDT12Q9BQG2 462 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 INTS9Q9NV88 658 aaKnown RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 NOP53Q9NZM5 478 aaKnown RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 ZBTB1Q9Y2K1 713 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 SPDYE3A6NKU9 549 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 STXBP3O00186 592 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 STARD3NLO95772 234 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 BRD2P25440 801 aaKnown RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 CALRP27797 417 aaKnown RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 PRPHP41219 470 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 LRRC63Q05C16 580 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 CHRNDQ07001 517 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 LRRC14Q15048 493 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 ZNF571Q7Z3V5 609 aaPredicted RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 KCNK18Q7Z418 384 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 DDX12PQ92771 950 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 AK8Q96MA6 479 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 BRIP1Q9BX63 1249 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 ADAM7Q9H2U9 754 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 SPATS2LQ9NUQ6 558 aaKnown RBP15.21■□□□□ 0.03
VPS52-212ENST00000445902 TRIM33Q9UPN9 1127 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 JAG2Q9Y219 1238 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 A0A1B0GUL6 1792 aa15.21■□□□□ 0.03
VPS52-212ENST00000445902 TFAP4Q01664 338 aa15.21■□□□□ 0.02
VPS52-212ENST00000445902 C11orf91Q3C1V1 193 aa15.21■□□□□ 0.02
VPS52-212ENST00000445902 TAX1BP1Q86VP1 789 aa15.21■□□□□ 0.02
VPS52-212ENST00000445902 ECT2Q9H8V3 914 aa15.21■□□□□ 0.02
VPS52-212ENST00000445902 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.21■□□□□ 0.02
VPS52-212ENST00000445902 NUP98P52948 1817 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 USP17L3A6NCW0 530 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 USP17L4A6NCW7 530 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 KIF3CO14782 793 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 FGGP02679 453 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 NQO1P15559 274 aaKnown RBP15.2■□□□□ 0.02
VPS52-212ENST00000445902 NAPAP54920 295 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 PLTPP55058 493 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 CRELD2Q6UXH1 353 aaPredicted RBP15.2■□□□□ 0.02
VPS52-212ENST00000445902 USP17L1Q7RTZ2 530 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 PIGWQ7Z7B1 504 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 LRRC57Q8N9N7 239 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 CCDC26Q8TAB7 109 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 GLG1Q92896 1179 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 PNMA5Q96PV4 448 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 MLXIPLQ9NP71 852 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 LAD1O00515 517 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 NCALDP61601 193 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 SEMA3FQ13275 785 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 CDCA2Q69YH5 1023 aaPredicted RBP15.2■□□□□ 0.02
VPS52-212ENST00000445902 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
VPS52-212ENST00000445902 GJA10Q969M2 543 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 VAT1LQ9HCJ6 419 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 SH3GLB2Q9NR46 395 aa15.2■□□□□ 0.02
VPS52-212ENST00000445902 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
VPS52-212ENST00000445902 KRT16P08779 473 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 RARAP10276 462 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 THEMIS2Q5TEJ8 643 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 MYOCDQ8IZQ8 938 aa15.19■□□□□ 0.02
VPS52-212ENST00000445902 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
VPS52-212ENST00000445902 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
VPS52-212ENST00000445902 ATP8B4Q8TF62 1192 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms