RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TRANK1O15050 2925 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 RRN3P2A6NIE6 340 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 UPP2O95045 317 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 NEFLP07196 543 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 ARP10275 920 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 RPS6KB1P23443 525 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 ACTR2P61160 394 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 JAKMIP3Q5VZ66 844 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 KRT40Q6A162 431 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 AGO4Q9HCK5 861 aaKnown RBP21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 C6orf50Q9HD87 102 aa21.03■□□□□ 0.96
AC004540.1-201ENST00000439120 SIP14410 1827 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 RBAK-RBAKDNI3L0D1 243 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 RPLP2P05387 115 aaKnown RBP21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 GHRP10912 638 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 CLK2P49760 499 aaKnown RBP21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 ERVK-21P61565 698 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 MCTP2Q6DN12 878 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 RPAINQ86UA6 219 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 DNAJB3Q8WWF6 145 aa21.02■□□□□ 0.96
AC004540.1-201ENST00000439120 M0QZ92 97 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 MEIS1O00470 390 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 CHRNA1P02708 482 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 INSRRP14616 1297 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 STAT5BP51692 787 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 HTRA4P83105 476 aaPredicted RBP21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 MKRN4PQ13434 485 aaPredicted RBP21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 NIPA1Q7RTP0 329 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 PLA2G4DQ86XP0 818 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 REXO1Q8N1G1 1221 aaKnown RBP21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 FBXO22Q8NEZ5 403 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 ADAMTS19Q8TE59 1207 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 TOP1MTQ969P6 601 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 OSBPL7Q9BZF2 842 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 FAM49AQ9H0Q0 323 aaPredicted RBP21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 LMCD1Q9NZU5 365 aa21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 PRRC2BQ5JSZ5 2229 aaKnown RBP21.01■□□□□ 0.95
AC004540.1-201ENST00000439120 NID2Q14112 1375 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 ESYT2A0FGR8 921 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 MBLAC1A4D2B0 266 aaPredicted RBP21■□□□□ 0.95
AC004540.1-201ENST00000439120 DDX39AO00148 427 aaKnown RBP21■□□□□ 0.95
AC004540.1-201ENST00000439120 TNFRSF10AO00220 468 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 BACH1O14867 736 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 PRPF3O43395 683 aaKnown RBP21■□□□□ 0.95
AC004540.1-201ENST00000439120 LPXNO60711 386 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 GNA11P29992 359 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 TFF2Q03403 129 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 ITGB3BPQ13352 177 aaPredicted RBP21■□□□□ 0.95
AC004540.1-201ENST00000439120 PLPPR4Q7Z2D5 763 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 PCYT2Q99447 389 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 SUGCTQ9HAC7 445 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 TCEAL9Q9UHQ7 104 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 COG5Q9UP83 839 aa21■□□□□ 0.95
AC004540.1-201ENST00000439120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 SLC26A2P50443 739 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 MRPS6P82932 125 aaKnown RBP20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 PLCB4Q15147 1175 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 MARCH8Q5T0T0 291 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 IER5Q5VY09 327 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 FAM160B1Q5W0V3 765 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 FBXL16Q8N461 479 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 CCDC148Q8NFR7 591 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 BICD2Q8TD16 824 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 PHKBQ93100 1093 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 SAMD11Q96NU1 681 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 UHRF1Q96T88 793 aaPredicted RBP20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 C17orf80Q9BSJ5 609 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 ZMYND12Q9H0C1 365 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 CDY2AQ9Y6F7 541 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 REV3LO60673 3130 aa20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 SPTBN5Q9NRC6 3674 aaKnown RBP20.99■□□□□ 0.95
AC004540.1-201ENST00000439120 POTEB3A0JP26 581 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 MGAT3Q09327 533 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 LPIN1Q14693 890 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 POTEBQ6S5H4 581 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 SP7Q8TDD2 431 aaPredicted RBP20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 HLA-CQ95604 372 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 SLC26A6Q9BXS9 759 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 RNF26Q9BY78 433 aaPredicted RBP20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 AGXT2Q9BYV1 514 aa20.98■□□□□ 0.95
AC004540.1-201ENST00000439120 FAM86B1E9PN63 330 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 IPO5O00410 1097 aaKnown RBP20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 CYP3A4P08684 503 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 FAM86B2P0C5J1 330 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 CCT2P78371 535 aaKnown RBP20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 SETQ01105 290 aaPredicted RBP20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 FBXO47Q5MNV8 452 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 MIS18BP1Q6P0N0 1132 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 TSHZ1Q6ZSZ6 1077 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 TRAPPC12Q8WVT3 735 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 ZBTB10Q96DT7 871 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 ZNF577Q9BSK1 485 aa20.97■□□□□ 0.95
AC004540.1-201ENST00000439120 EPB41L2O43491 1005 aaKnown RBP20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 PPFIA3O75145 1194 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 ATG7O95352 703 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 PKN1Q16512 942 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 RUFY3Q7L099 469 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 TRIM22Q8IYM9 498 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 IL17RAQ96F46 866 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 PCDHA2Q9Y5H9 948 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms