RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 GANQ9H2C0 597 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 KDM4CQ9H3R0 1056 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 ATP6V0A4Q9HBG4 840 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 RIC8AQ9NPQ8 531 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 STK17AQ9UEE5 414 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 ATP8A1Q9Y2Q0 1164 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 ITGB4P16144 1822 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 CES2O00748 559 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 CLGNO14967 610 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 CAND2O75155 1236 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 TRIM37O94972 964 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 TDP2O95551 362 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 COASYQ13057 564 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 SNX29Q8TEQ0 813 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 TRIM51Q9BSJ1 452 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 FAM170AA1A519 330 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 SHBGP04278 402 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 MTMR3Q13615 1198 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 ERMARDQ5T6L9 678 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 TRIM59Q8IWR1 403 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 NR2E1Q9Y466 385 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 CCT8L1PA6NM43 557 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 NEBLO76041 1014 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 TSPY3P0CV98 308 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 TSPY8P0CW00 308 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 SLC8A1P32418 973 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 PPP2R5AQ15172 486 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 ARHGAP27Q6ZUM4 889 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 ARMC9Q7Z3E5 817 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 PROM2Q8N271 834 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 STAMBPL1Q96FJ0 436 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 MTFR1LQ9H019 292 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 MKNK2Q9HBH9 465 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 SLC24A3Q9HC58 644 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
NPC1L1-203ENST00000423141 BCL9O00512 1426 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 EDIL3O43854 480 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 SKAP2O75563 359 aaPredicted RBP18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 IRF2BP2Q7Z5L9 587 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 TCP11Q8WWU5 503 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 TLCD1Q96CP7 247 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 DNAJC19Q96DA6 116 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 CALR3Q96L12 384 aaKnown RBP18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 FAM129AQ9BZQ8 928 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 CHN1P15882 459 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 GBP2P32456 591 aaPredicted RBP18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 CRYMQ14894 314 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 NAA25Q14CX7 972 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 C12orf60Q5U649 245 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 CCDC197Q8NCU1 140 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 TPCN2Q8NHX9 752 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 ZNF317Q96PQ6 595 aaPredicted RBP18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 UIMC1Q96RL1 719 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
NPC1L1-203ENST00000423141 GHRP10912 638 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 SLC9A1P19634 815 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 COPB2P35606 906 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 CUL5Q93034 780 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 NAGPAQ9UK23 515 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 RTN2O75298 545 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 CLTAP09496 248 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 FAM26FQ5R3K3 315 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 PEX26Q7Z412 305 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 ATP8B4Q8TF62 1192 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 PIGSQ96S52 555 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 L3MBTL1Q9Y468 752 aa18.19■□□□□ 0.5
NPC1L1-203ENST00000423141 NPHP3-ACAD11A0A0J9YXS1 232 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 SMIM23A6NLE4 172 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 BTNL10A8MVZ5 291 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 CAMTA2O94983 1202 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 MMEP08473 750 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 GNA11P29992 359 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 FXR2P51116 673 aaKnown RBP eCLIP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 MYO1EQ12965 1108 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 UBAP2Q5T6F2 1119 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 ALKBH5Q6P6C2 394 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 SELENOSQ9BQE4 189 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 EPB41L4BQ9H329 900 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 PANK4Q9NVE7 773 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 A0A0G2JS52 829 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 EPS15P42566 896 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 KCNH2Q12809 1159 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 PSMD2Q13200 908 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 FAM133BQ5BKY9 247 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 INTS5Q6P9B9 1019 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 ADAT2Q7Z6V5 191 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 TBC1D1Q86TI0 1168 aaPredicted RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 P3H4Q92791 437 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms