RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CHMP2AO43633 222 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 NEMFO60524 1076 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 PSAPP07602 524 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 ATP4AP20648 1035 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 SYT1P21579 422 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 SFNP31947 248 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 MCM7P33993 719 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 SPIRE1Q08AE8 756 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 PPP2R5CQ13362 524 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 ORC2Q13416 577 aaPredicted RBP25.24■■□□□ 1.63
PTCD3-203ENST00000409783 PLCB4Q15147 1175 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 TTC38Q5R3I4 469 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 RDM1Q8NG50 284 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 ZNF302Q9NR11 478 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 SETD4Q9NVD3 440 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 TCEAL9Q9UHQ7 104 aa25.24■■□□□ 1.63
PTCD3-203ENST00000409783 UMODL1Q5DID0 1318 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 IGSF9BQ9UPX0 1349 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 C17orf102A2RUQ5 167 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 EML1O00423 815 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 BACH1O14867 736 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 TIMP1P01033 207 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 PDCP20941 246 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 MAGEA10P43363 369 aaPredicted RBP25.23■■□□□ 1.63
PTCD3-203ENST00000409783 JAK3P52333 1124 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 NBR1Q14596 966 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 ZNF174Q15697 407 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 CALCRLQ16602 461 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 FAM160B1Q5W0V3 765 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 SLFN12Q8IYM2 578 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 DHX38Q92620 1227 aaKnown RBP25.23■■□□□ 1.63
PTCD3-203ENST00000409783 PRO3102Q9H379 93 aa25.23■■□□□ 1.63
PTCD3-203ENST00000409783 NOL7Q9UMY1 257 aaKnown RBP25.23■■□□□ 1.63
PTCD3-203ENST00000409783 RAG1P15918 1043 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 SLC26A2P50443 739 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 MIER3Q7Z3K6 550 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 C4orf32Q8N8J7 132 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 LMBR1Q8WVP7 490 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 BADQ92934 168 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 GABBR1Q9UBS5 961 aa25.22■■□□□ 1.63
PTCD3-203ENST00000409783 NRCAMQ92823 1304 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 ZNF862O60290 1169 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 BAG4O95429 457 aaKnown RBP25.21■■□□□ 1.63
PTCD3-203ENST00000409783 MDM2Q00987 491 aaPredicted RBP25.21■■□□□ 1.63
PTCD3-203ENST00000409783 UGCGQ16739 394 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 PDXDC2PQ6P474 469 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 WNT8BQ93098 351 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 PPP1R12CQ9BZL4 782 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 HIPK3Q9H422 1215 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 SAMM50Q9Y512 469 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 PCDHB6Q9Y5E3 794 aa25.21■■□□□ 1.63
PTCD3-203ENST00000409783 TREHO43280 583 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 INSRRP14616 1297 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 CYP2C18P33260 490 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 RBL2Q08999 1139 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 PPFIA1Q13136 1202 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 PTK7Q13308 1070 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 TRIM71Q2Q1W2 868 aaKnown RBP25.2■■□□□ 1.62
PTCD3-203ENST00000409783 MARCH8Q5T0T0 291 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 SERINC5Q86VE9 423 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 ATP8B4Q8TF62 1192 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 WNT8AQ9H1J5 351 aa25.2■■□□□ 1.62
PTCD3-203ENST00000409783 TANC1Q9C0D5 1861 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 POTEB3A0JP26 581 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 VPS37CA5D8V6 355 aaPredicted RBP25.19■■□□□ 1.62
PTCD3-203ENST00000409783 MARCH6O60337 910 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 GRIK4Q16099 956 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 MFSD5Q6N075 450 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 POTEBQ6S5H4 581 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 ATP6V0A1Q93050 837 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 TTC12Q9H892 705 aaPredicted RBP25.19■■□□□ 1.62
PTCD3-203ENST00000409783 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.19■■□□□ 1.62
PTCD3-203ENST00000409783 PCDHA12Q9UN75 941 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 MTMR6Q9Y217 621 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 NOD1Q9Y239 953 aa25.19■■□□□ 1.62
PTCD3-203ENST00000409783 MBLAC1A4D2B0 266 aaPredicted RBP25.18■■□□□ 1.62
PTCD3-203ENST00000409783 TXKP42681 527 aa25.18■■□□□ 1.62
PTCD3-203ENST00000409783 RILPL1Q5EBL4 403 aa25.18■■□□□ 1.62
PTCD3-203ENST00000409783 CHRDL2Q6WN34 429 aa25.18■■□□□ 1.62
PTCD3-203ENST00000409783 TRPC6Q9Y210 931 aa25.18■■□□□ 1.62
PTCD3-203ENST00000409783 SCN5AQ14524 2016 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 ZBTB42B2RXF5 422 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 PITPNM1O00562 1244 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 HBP1O60381 514 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 STBD1O95210 358 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 OR52Z1P0C646 297 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 GNAT1P11488 350 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 BMP8BP34820 402 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 EPHA7Q15375 998 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 BRAPQ7Z569 592 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 FERMT3Q86UX7 667 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 CAGE1Q8TC20 777 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 TRAPPC12Q8WVT3 735 aa25.17■■□□□ 1.62
PTCD3-203ENST00000409783 LBHD1Q9BQE6 289 aaPredicted RBP25.17■■□□□ 1.62
PTCD3-203ENST00000409783 RRN3P2A6NIE6 340 aa25.16■■□□□ 1.62
PTCD3-203ENST00000409783 STX6O43752 255 aa25.16■■□□□ 1.62
PTCD3-203ENST00000409783 EPHB4P54760 987 aa25.16■■□□□ 1.62
PTCD3-203ENST00000409783 RESTQ13127 1097 aa25.16■■□□□ 1.62
PTCD3-203ENST00000409783 TRAF7Q6Q0C0 670 aa25.16■■□□□ 1.62
PTCD3-203ENST00000409783 BBXQ8WY36 941 aaPredicted RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms