RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FGFR1OPO95684 399 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 EIF4A3P38919 411 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 BAG6P46379 1132 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 EPM2AIP1Q7L775 607 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 TPH2Q8IWU9 490 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 GOLGA1Q92805 767 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 HSD17B14Q9BPX1 270 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 HAUS4Q9H6D7 363 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 RABGAP1Q9Y3P9 1069 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 SLITRK3O94933 977 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 NR2F2P24468 414 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 CYLC1P35663 651 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 GRIPAP1Q4V328 841 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 FOXR2Q6PJQ5 311 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 SLC5A5Q92911 643 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 PARD6BQ9BYG5 372 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 TLR2O60603 784 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 KIF11P52732 1056 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 ADAM9Q13443 819 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 KSR1Q8IVT5 923 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 ZC3H3Q8IXZ2 948 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 TXLNBQ8N3L3 684 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 LSM14BQ9BX40 385 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 UNC45AQ9H3U1 944 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 ANKZF1Q9H8Y5 726 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 PPP1R1BQ9UD71 204 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 FZD1Q9UP38 647 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 ASTN1O14525 1302 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 DDX39AO00148 427 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 ZRANB2O95218 330 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 PTGER2P43116 358 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 CEP55Q53EZ4 464 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 MUM1L1Q5H9M0 696 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 RINT1Q6NUQ1 792 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 NOA1Q8NC60 698 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 CCDC42Q96M95 316 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 CEP63Q96MT8 703 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 TAOK3Q9H2K8 898 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 HOMER2Q9NSB8 354 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 MYO1AQ9UBC5 1043 aa16.74■□□□□ 0.27
SCAMP4-202ENST00000409472 SLC26A4O43511 780 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 EYA4O95677 639 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 ASNSP08243 561 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 KRT83P78385 493 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 CDK17Q00537 523 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 HGSNATQ68CP4 663 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 CCDC170Q8IYT3 715 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 PNKPQ96T60 521 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 CAPN6Q9Y6Q1 641 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 ZMYM2Q9UBW7 1377 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 GAS7O60861 476 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 SASH3O75995 380 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 ITGB5P18084 799 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 CASP4P49662 377 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 PRELPP51888 382 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 MAP3K10Q02779 954 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 GFPT1Q06210 699 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 TRAPPC11Q7Z392 1133 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 GPR161Q8N6U8 529 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 RABGGTAQ92696 567 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 RSPH14Q9UHP6 348 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 FEM1BQ9UK73 627 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 MYO6Q9UM54 1294 aa16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 MRPL11Q9Y3B7 192 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-202ENST00000409472 GCNT3O95395 438 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 ACTN1P12814 892 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 VAV2P52735 878 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 MARSP56192 900 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 PPP2R5CQ13362 524 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 KNOP1Q1ED39 458 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 ZC2HC1CQ53FD0 456 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 CACNA2D4Q7Z3S7 1137 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 PURBQ96QR8 312 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 ZNF577Q9BSK1 485 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 SALL4Q9UJQ4 1053 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 CLIC2O15247 247 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 AKAP3O75969 853 aa16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-202ENST00000409472 RASSF7Q02833 373 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms