RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZNF536O15090 1300 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 TARSL2A2RTX5 802 aaKnown RBP16.99■□□□□ 0.31
CPSF7-202ENST00000394888 EPHA7Q15375 998 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 C1orf186Q6ZWK4 172 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 GSPT2Q8IYD1 628 aaKnown RBP16.99■□□□□ 0.31
CPSF7-202ENST00000394888 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
CPSF7-202ENST00000394888 CAPZA3Q96KX2 299 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 GLT8D2Q9H1C3 349 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 SIP14410 1827 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 A0A087X0T9 212 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 FAM228BP0C875 321 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 FAM193AP78312 1265 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 SLC5A5Q92911 643 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 CCDC42Q96M95 316 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
CPSF7-202ENST00000394888 LRRC27Q9C0I9 530 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 GPR88Q9GZN0 384 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 TRAF5O00463 557 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 MAP3K10Q02779 954 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 KIAA1328Q86T90 577 aa16.99■□□□□ 0.31
CPSF7-202ENST00000394888 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 SLC9A1P19634 815 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 AARSP49588 968 aaKnown RBP eCLIP16.98■□□□□ 0.31
CPSF7-202ENST00000394888 ITIH3Q06033 890 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 CSRNP1Q96S65 589 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 CRACR2AQ9BSW2 395 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 DEFB129Q9H1M3 183 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 NLRC4Q9NPP4 1024 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 JRKLQ9Y4A0 524 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 HERC4Q5GLZ8 1057 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-202ENST00000394888 RINT1Q6NUQ1 792 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 DNAAF5Q86Y56 855 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 MMGT1Q8N4V1 131 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 AENQ8WTP8 325 aaKnown RBP16.98■□□□□ 0.31
CPSF7-202ENST00000394888 OSBPL9Q96SU4 736 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
CPSF7-202ENST00000394888 H0YIN7 160 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 ZMYND10O75800 440 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
CPSF7-202ENST00000394888 PCNTO95613 3336 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 POLR3GO15318 223 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 PON1P27169 355 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 SLC35C1Q96A29 364 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 DMGDHQ9UI17 866 aaKnown RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 BHMG1C9JSJ3 638 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 ZNF131P52739 623 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 MAPK7Q13164 816 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 POTEB2H3BUK9 544 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 KLRC1P26715 233 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 POLR2FP61218 127 aaKnown RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 TUBB4BP68371 445 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 CYP4A11Q02928 519 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 ZNF571Q7Z3V5 609 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-202ENST00000394888 DAW1Q8N136 415 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 HPCAL4Q9UM19 191 aa16.97■□□□□ 0.31
CPSF7-202ENST00000394888 RPTORQ8N122 1335 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 RASSF7Q02833 373 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 ADAM9Q13443 819 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 COG2Q14746 738 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 TSGA10Q9BZW7 698 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 OLFML3Q9NRN5 406 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-202ENST00000394888 PPP1R37O75864 691 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 SERPING1P05155 500 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPSF7-202ENST00000394888 NAB2Q15742 525 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 CCNI2Q6ZMN8 369 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-202ENST00000394888 TRIM58Q8NG06 486 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 CAMKK2Q96RR4 588 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 BHMT2Q9H2M3 363 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 ZBTB21Q9ULJ3 1066 aa16.96■□□□□ 0.31
CPSF7-202ENST00000394888 EYA4O95677 639 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 CXCR5P32302 372 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 KIF5AQ12840 1032 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 SPP2Q13103 211 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 LRRC1Q9BTT6 524 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 SHTN1A0MZ66 631 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 NR2F2P24468 414 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 SLC18A3Q16572 532 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 HDXQ7Z353 690 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms