RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 SFR1Q86XK3 245 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 THAP9Q9H5L6 903 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 SPDYE4A6NLX3 237 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 CLCN6P51797 869 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 RBM5P52756 815 aaKnown RBP eCLIP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 GUF1Q8N442 669 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 COG1Q8WTW3 980 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 KAT5Q92993 513 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 KLRG1Q96E93 195 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 SLF1Q9BQI6 1058 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 DNAI1Q9UI46 699 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 NR2E1Q9Y466 385 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 PHLPP2Q6ZVD8 1323 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 ECHS1P30084 290 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 DCAF12L1Q5VU92 463 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 CERS3Q8IU89 383 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 SLC35F6Q8N357 371 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 CCDC148Q8NFR7 591 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 DYDC2Q96IM9 177 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 BHMT2Q9H2M3 363 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 XPNPEP1Q9NQW7 623 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 GJD2Q9UKL4 321 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 UBIAD1Q9Y5Z9 338 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 COL4A4P53420 1690 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 LRRC53A6NM62 1247 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 STAT2P52630 851 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 MOXD1Q6UVY6 613 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 CREG2Q8IUH2 290 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 KIF18AQ8NI77 898 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 KIFC3Q9BVG8 833 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 KCNH7Q9NS40 1196 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 AFG3L2Q9Y4W6 797 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 RALGAPA2Q2PPJ7 1873 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 A0A1W2PQC6 194 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 H3BQF6 201 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 VWA5AO00534 786 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 ARHGAP6O43182 974 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 PRPF6O94906 941 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 SFPQP23246 707 aaKnown RBP eCLIP9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 RPS6P62753 249 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 ANKS1BQ7Z6G8 1248 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 TAS2R14Q9NYV8 317 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 A0A087X0T9 212 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 NDUFA10O95299 355 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 ARIH2O95376 493 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 FAM228BP0C875 321 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 KCNA2P16389 499 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 GNA11P29992 359 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 PGM5Q15124 567 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 EPHA7Q15375 998 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 TRAPPC11Q7Z392 1133 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 NELFCDQ8IXH7 590 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 TRAF3IP3Q9Y228 551 aa9.41□□□□□ -0.9
GAPVD1-204ENST00000394083 CFHP08603 1231 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 MKRN4PQ13434 485 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 CCDC96Q2M329 555 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 MMS19Q96T76 1030 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 RAVER2Q9HCJ3 691 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 ZSCAN5CA6NGD5 496 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 GFPT1Q06210 699 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 Q3C1V9 767 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 CRACR2AQ9BSW2 395 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 AMNQ9BXJ7 453 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■□□□□ 9.7
GAPVD1-204ENST00000394083 IQCF3P0C7M6 154 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 TPD52L1Q16890 204 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 SLC30A5Q8TAD4 765 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 CARD6Q9BX69 1037 aa9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-204ENST00000394083 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 AKR1B15C9JRZ8 316 aaPredicted RBP9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 H7C1D1 291 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 N4BP1O75113 896 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 ICAM1P05362 532 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 UBA7P41226 1012 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 TGFB2P61812 414 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 AKAP17AQ02040 695 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 ZBTB41Q5SVQ8 909 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 ZNF571Q7Z3V5 609 aaPredicted RBP9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 FCHSD1Q86WN1 690 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 HERPUD2Q9BSE4 406 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 NAT10Q9H0A0 1025 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 NDST4Q9H3R1 872 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 STK32BQ9NY57 414 aa9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-204ENST00000394083 ADM5C9JUS6 153 aa9.39□□□□□ -0.91
GAPVD1-204ENST00000394083 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms